Analysis of interatomic Contacts of Structural Units in PDB entry:
3VVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VVP entry

There are 2 chains in PDB entry 3VVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LYS 453
B
 LYS 4ARG 447
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3VVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 13Right-handed alpha
Helix 2
2
A
15 46Right-handed alpha
Helix 3
3
A
49 87Right-handed alpha
Helix 4
4
A
89 116Right-handed alpha
Helix 5
5
A
118 124Right-handed alpha
Helix 6
6
A
133 145Right-handed alpha
Helix 7
7
A
146 164Right-handed alpha
Helix 8
8
A
165 189Right-handed alpha
Helix 9
9
A
195 218Right-handed alpha
Helix 10
10
A
235 272Right-handed alpha
Helix 11
11
A
275 289Right-handed alpha
Helix 12
12
A
290 310Right-handed alpha
Helix 13
13
A
312 340Right-handed alpha
Helix 14
14
A
362 366Right-handed alpha
Helix 15
15
A
368 373Right-handed 310
Helix 16
16
A
376 389Right-handed alpha
Helix 17
17
A
391 404Right-handed alpha
Helix 18
18
A
406 417Right-handed alpha
Helix 19
19
A
421 451Right-handed alpha
Helix 20
20
B
6 13Right-handed alpha
Helix 21
21
B
15 45Right-handed alpha
Helix 22
22
B
46 48Right-handed 310
Helix 23
23
B
49 87Right-handed alpha
Helix 24
24
B
89 116Right-handed alpha
Helix 25
25
B
118 126Right-handed alpha
Helix 26
26
B
134 146Right-handed alpha
Helix 27
27
B
146 162Right-handed alpha
Helix 28
28
B
165 189Right-handed alpha
Helix 29
29
B
195 218Right-handed alpha
Helix 30
30
B
235 270Right-handed alpha
Helix 31
31
B
273 290Right-handed alpha
Helix 32
32
B
290 310Right-handed alpha
Helix 33
33
B
312 338Right-handed alpha
Helix 34
34
B
364 369Right-handed alpha
Helix 35
35
B
376 389Right-handed alpha
Helix 36
36
B
391 404Right-handed alpha
Helix 37
37
B
406 417Right-handed alpha
Helix 38
38
B
422 447Right-handed alpha
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There are no sheets in PDB entry 3VVP
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