Analysis of interatomic Contacts of Structural Units in PDB entry:
3VVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VVS entry

There are 2 chains in PDB entry 3VVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4THR 454
B
 VAL 2VAL 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3VVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
15 47Right-handed alpha
Helix 3
3
A
49 87Right-handed alpha
Helix 4
4
A
89 116Right-handed alpha
Helix 5
5
A
118 126Right-handed alpha
Helix 6
6
A
131 146Right-handed alpha
Helix 7
7
A
146 163Right-handed alpha
Helix 8
8
A
165 189Right-handed alpha
Helix 9
9
A
194 219Right-handed alpha
Helix 10
10
A
235 287Right-handed alpha
Helix 11
11
A
290 310Right-handed alpha
Helix 12
12
A
312 341Right-handed alpha
Helix 13
13
A
341 349Right-handed alpha
Helix 14
14
A
359 367Right-handed alpha
Helix 15
15
A
368 374Right-handed 310
Helix 16
16
A
375 389Right-handed alpha
Helix 17
17
A
391 404Right-handed alpha
Helix 18
18
A
406 417Right-handed alpha
Helix 19
19
A
422 454Right-handed alpha
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There are no sheets in PDB entry 3VVS
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