Analysis of interatomic Contacts of Structural Units in PDB entry:
3VW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VW4 entry

There are 6 chains in PDB entry 3VW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 170CYS 291
B
 HIS 171LYS 290
C
 A 3 T 22
D
 G 13 C 32
E
 A 3 A 23
F
 G 13 C 32
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3VW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
172 191Right-handed alpha
Helix 2
2
A
197 216Right-handed alpha
Helix 3
3
A
221 240Right-handed alpha
Helix 4
4
A
241 259Right-handed alpha
Helix 5
5
A
268 273Right-handed alpha
Helix 6
6
A
273 278Right-handed alpha
Helix 7
7
A
281 291Right-handed alpha
Helix 8
8
B
174 191Right-handed alpha
Helix 9
9
B
197 214Right-handed alpha
Helix 10
10
B
221 240Right-handed alpha
Helix 11
11
B
241 260Right-handed alpha
Helix 12
12
B
268 273Right-handed alpha
Helix 13
13
B
275 279Right-handed 310
Helix 14
14
B
281 290Right-handed alpha
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There are no sheets in PDB entry 3VW4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il