Analysis of interatomic Contacts of Structural Units in PDB entry:
3VWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VWE entry

There is 1 chain in PDB entry 3VWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ALA 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3VWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 11Right-handed alpha
Helix 2
2
A
35 58Right-handed alpha
Helix 3
3
A
66 73Right-handed alpha
Helix 4
4
A
128 131Right-handed 310
Helix 5
5
A
134 148Right-handed alpha
Helix 6
6
A
150 154Right-handed 310
Helix 7
7
A
160 172Right-handed alpha
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There are 2 sheets in PDB entry 3VWE. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
93 101anti-parallel
Strand 4
A
119 126anti-parallel
Strand 5
A
155 157parallel
Strand 6
A
183 186anti-parallel
Strand 7
A
176 177anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
A
113 116anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il