Analysis of interatomic Contacts of Structural Units in PDB entry:
3VX4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VX4 entry

There are 2 chains in PDB entry 3VX4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 522ASN 760
D
 ASN 521ASN 760
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3VX4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
566 575Right-handed alpha
Helix 2
2
A
596 603Right-handed alpha
Helix 3
3
A
618 624Right-handed alpha
Helix 4
4
A
631 642Right-handed alpha
Helix 5
5
A
644 651Right-handed alpha
Helix 6
6
A
653 656Right-handed 310
Helix 7
7
A
666 682Right-handed alpha
Helix 8
8
A
696 709Right-handed alpha
Helix 9
9
A
721 726Right-handed alpha
Helix 10
10
A
744 751Right-handed alpha
Helix 11
11
A
755 759Right-handed 310
Helix 12
12
D
521 525Right-handed 310
Helix 13
13
D
566 575Right-handed alpha
Helix 14
14
D
596 603Right-handed alpha
Helix 15
15
D
618 624Right-handed alpha
Helix 16
16
D
631 642Right-handed alpha
Helix 17
17
D
644 651Right-handed alpha
Helix 18
18
D
653 656Right-handed 310
Helix 19
19
D
666 680Right-handed alpha
Helix 20
20
D
696 709Right-handed alpha
Helix 21
21
D
721 726Right-handed alpha
Helix 22
22
D
744 751Right-handed alpha
Helix 23
23
D
753 760Right-handed alpha
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There are 6 sheets in PDB entry 3VX4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 551first strand
Strand 2
A
528 535anti-parallel
Strand 3
A
582 587anti-parallel
Strand 4
A
590 591anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 607first strand
Strand 2
A
685 689parallel
Strand 3
A
714 718parallel
Strand 4
A
556 560parallel
Strand 5
A
730 735parallel
Strand 6
A
738 743anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
658 659anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
544 551first strand
Strand 2
D
528 535anti-parallel
Strand 3
D
582 587anti-parallel
Strand 4
D
590 591anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
604 607first strand
Strand 2
D
685 689parallel
Strand 3
D
714 718parallel
Strand 4
D
556 561parallel
Strand 5
D
730 735parallel
Strand 6
D
738 743anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
616 617first strand
Strand 2
D
658 659anti-parallel
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