Analysis of interatomic Contacts of Structural Units in PDB entry:
3VYC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VYC entry

There is 1 chain in PDB entry 3VYC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 47ASP 1084
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 3VYC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 56Right-handed alpha
Helix 2
2
A
66 76Right-handed alpha
Helix 3
3
A
83 104Right-handed alpha
Helix 4
4
A
104 110Right-handed alpha
Helix 5
5
A
111 130Right-handed alpha
Helix 6
6
A
136 147Right-handed alpha
Helix 7
7
A
148 167Right-handed alpha
Helix 8
8
A
176 186Right-handed alpha
Helix 9
9
A
186 203Right-handed alpha
Helix 10
10
A
206 221Right-handed alpha
Helix 11
11
A
226 231Right-handed alpha
Helix 12
12
A
233 240Right-handed alpha
Helix 13
13
A
240 245Right-handed alpha
Helix 14
14
A
245 260Right-handed alpha
Helix 15
15
A
272 290Right-handed alpha
Helix 16
16
A
296 304Right-handed alpha
Helix 17
17
A
305 333Right-handed alpha
Helix 18
18
A
336 351Right-handed alpha
Helix 19
19
A
355 376Right-handed alpha
Helix 20
20
A
414 419Right-handed 310
Helix 21
21
A
420 433Right-handed alpha
Helix 22
22
A
458 479Right-handed alpha
Helix 23
23
A
479 496Right-handed alpha
Helix 24
24
A
501 515Right-handed alpha
Helix 25
25
A
520 542Right-handed alpha
Helix 26
26
A
544 561Right-handed alpha
Helix 27
27
A
562 569Right-handed alpha
Helix 28
28
A
569 584Right-handed alpha
Helix 29
29
A
588 607Right-handed alpha
Helix 30
30
A
607 612Right-handed alpha
Helix 31
31
A
620 628Right-handed alpha
Helix 32
32
A
628 633Right-handed alpha
Helix 33
33
A
637 653Right-handed alpha
Helix 34
34
A
657 669Right-handed alpha
Helix 35
35
A
669 686Right-handed alpha
Helix 36
36
A
687 691Right-handed 310
Helix 37
37
A
692 714Right-handed alpha
Helix 38
38
A
717 746Right-handed alpha
Helix 39
39
A
747 752Right-handed 310
Helix 40
40
A
753 777Right-handed alpha
Helix 41
41
A
779 787Right-handed alpha
Helix 42
42
A
787 802Right-handed alpha
Helix 43
43
A
803 807Right-handed 310
Helix 44
44
A
808 823Right-handed alpha
Helix 45
45
A
826 846Right-handed alpha
Helix 46
46
A
852 870Right-handed alpha
Helix 47
47
A
871 876Right-handed alpha
Helix 48
48
A
878 895Right-handed alpha
Helix 49
49
A
897 919Right-handed alpha
Helix 50
50
A
921 931Right-handed alpha
Helix 51
51
A
931 945Right-handed alpha
Helix 52
52
A
951 968Right-handed alpha
Helix 53
53
A
987 1003Right-handed alpha
Helix 54
54
A
1007 1020Right-handed alpha
Helix 55
55
A
1024 1044Right-handed alpha
Helix 56
56
A
1048 1071Right-handed alpha
Helix 57
57
A
1078 1082Right-handed 310
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There is 1 sheet ( A) in PDB entry 3VYC.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 445first strand
Strand 2
A
451 453anti-parallel
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