Analysis of interatomic Contacts of Structural Units in PDB entry:
3W05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W05 entry

There are 2 chains in PDB entry 3W05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 55TYR 318
B
 LYS 55TYR 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3W05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 60Right-handed alpha
Helix 2
2
A
81 86Right-handed 310
Helix 3
3
A
88 92Right-handed 310
Helix 4
4
A
110 114Right-handed 310
Helix 5
5
A
117 120Right-handed 310
Helix 6
6
A
121 136Right-handed alpha
Helix 7
7
A
147 160Right-handed alpha
Helix 8
8
A
187 201Right-handed alpha
Helix 9
9
A
201 215Right-handed alpha
Helix 10
10
A
218 230Right-handed alpha
Helix 11
11
A
233 246Right-handed alpha
Helix 12
12
A
249 256Right-handed 310
Helix 13
13
A
274 283Right-handed alpha
Helix 14
14
A
298 303Right-handed alpha
Helix 15
15
A
303 315Right-handed alpha
Helix 16
16
B
56 60Right-handed alpha
Helix 17
17
B
81 86Right-handed 310
Helix 18
18
B
88 92Right-handed 310
Helix 19
19
B
110 114Right-handed 310
Helix 20
20
B
117 120Right-handed 310
Helix 21
21
B
121 136Right-handed alpha
Helix 22
22
B
147 160Right-handed alpha
Helix 23
23
B
187 201Right-handed alpha
Helix 24
24
B
201 215Right-handed alpha
Helix 25
25
B
218 232Right-handed alpha
Helix 26
26
B
233 246Right-handed alpha
Helix 27
27
B
249 256Right-handed 310
Helix 28
28
B
274 283Right-handed alpha
Helix 29
29
B
298 303Right-handed alpha
Helix 30
30
B
303 315Right-handed alpha
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There are 2 sheets in PDB entry 3W05. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
97 100anti-parallel
Strand 3
A
71 75parallel
Strand 4
A
141 146parallel
Strand 5
A
164 170parallel
Strand 6
A
260 264parallel
Strand 7
A
287 291parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 66first strand
Strand 2
B
97 100anti-parallel
Strand 3
B
71 75parallel
Strand 4
B
141 146parallel
Strand 5
B
164 170parallel
Strand 6
B
260 264parallel
Strand 7
B
287 291parallel
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