Analysis of interatomic Contacts of Structural Units in PDB entry:
3W0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W0L entry

There are 4 chains in PDB entry 3W0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6VAL 454
B
 THR 4ASN 605
C
 GLN 6MET 455
D
 THR 4SER 603
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 3W0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
14 17Right-handed 310
Helix 3
3
A
19 39Right-handed alpha
Helix 4
4
A
104 110Right-handed alpha
Helix 5
5
A
111 130Right-handed alpha
Helix 6
6
A
173 186Right-handed alpha
Helix 7
7
A
197 208Right-handed alpha
Helix 8
8
A
232 234Right-handed 310
Helix 9
9
A
249 253Right-handed 310
Helix 10
10
A
264 273Right-handed alpha
Helix 11
11
A
282 287Right-handed alpha
Helix 12
12
A
290 305Right-handed alpha
Helix 13
13
A
308 312Right-handed 310
Helix 14
14
A
324 332Right-handed alpha
Helix 15
15
A
338 348Right-handed alpha
Helix 16
16
A
353 390Right-handed alpha
Helix 17
17
A
403 408Right-handed alpha
Helix 18
18
A
409 424Right-handed alpha
Helix 19
19
A
440 454Right-handed alpha
Helix 20
20
B
17 21Right-handed 310
Helix 21
21
B
29 33Right-handed 310
Helix 22
22
B
35 39Right-handed 310
Helix 23
23
B
45 59Right-handed alpha
Helix 24
24
B
60 62Right-handed 310
Helix 25
25
B
65 69Right-handed 310
Helix 26
26
B
76 96Right-handed alpha
Helix 27
27
B
108 128Right-handed alpha
Helix 28
28
B
141 146Right-handed 310
Helix 29
29
B
149 154Right-handed 310
Helix 30
30
B
155 167Right-handed alpha
Helix 31
31
B
184 196Right-handed alpha
Helix 32
32
B
210 214Right-handed 310
Helix 33
33
B
225 239Right-handed alpha
Helix 34
34
B
260 280Right-handed alpha
Helix 35
35
B
287 306Right-handed alpha
Helix 36
36
B
308 325Right-handed alpha
Helix 37
37
B
335 346Right-handed alpha
Helix 38
38
B
347 352Right-handed alpha
Helix 39
39
B
366 371Right-handed alpha
Helix 40
40
B
377 385Right-handed 310
Helix 41
41
B
387 394Right-handed alpha
Helix 42
42
B
395 399Right-handed 310
Helix 43
43
B
414 429Right-handed alpha
Helix 44
44
B
445 452Right-handed alpha
Helix 45
45
B
465 467Right-handed 310
Helix 46
46
B
468 496Right-handed alpha
Helix 47
47
B
511 526Right-handed alpha
Helix 48
48
B
529 543Right-handed alpha
Helix 49
49
B
555 564Right-handed alpha
Helix 50
50
B
568 579Right-handed alpha
Helix 51
51
B
582 592Right-handed alpha
Helix 52
52
B
595 605Right-handed alpha
Helix 53
53
C
7 14Right-handed alpha
Helix 54
54
C
19 39Right-handed alpha
Helix 55
55
C
117 130Right-handed alpha
Helix 56
56
C
175 183Right-handed alpha
Helix 57
57
C
191 195Right-handed 310
Helix 58
58
C
197 210Right-handed alpha
Helix 59
59
C
249 253Right-handed 310
Helix 60
60
C
264 273Right-handed alpha
Helix 61
61
C
282 287Right-handed alpha
Helix 62
62
C
290 304Right-handed alpha
Helix 63
63
C
324 332Right-handed alpha
Helix 64
64
C
338 348Right-handed alpha
Helix 65
65
C
353 391Right-handed alpha
Helix 66
66
C
403 409Right-handed alpha
Helix 67
67
C
409 424Right-handed alpha
Helix 68
68
C
440 455Right-handed alpha
Helix 69
69
D
29 33Right-handed 310
Helix 70
70
D
35 39Right-handed 310
Helix 71
71
D
40 44Right-handed 310
Helix 72
72
D
45 58Right-handed alpha
Helix 73
73
D
59 62Right-handed 310
Helix 74
74
D
76 95Right-handed alpha
Helix 75
75
D
108 127Right-handed alpha
Helix 76
76
D
149 154Right-handed 310
Helix 77
77
D
155 167Right-handed alpha
Helix 78
78
D
184 197Right-handed alpha
Helix 79
79
D
210 214Right-handed 310
Helix 80
80
D
225 239Right-handed alpha
Helix 81
81
D
260 281Right-handed alpha
Helix 82
82
D
287 307Right-handed alpha
Helix 83
83
D
308 325Right-handed alpha
Helix 84
84
D
335 346Right-handed alpha
Helix 85
85
D
347 352Right-handed alpha
Helix 86
86
D
366 371Right-handed alpha
Helix 87
87
D
387 395Right-handed alpha
Helix 88
88
D
396 399Right-handed 310
Helix 89
89
D
414 426Right-handed alpha
Helix 90
90
D
445 450Right-handed alpha
Helix 91
91
D
468 496Right-handed alpha
Helix 92
92
D
511 526Right-handed alpha
Helix 93
93
D
529 537Right-handed alpha
Helix 94
94
D
538 540Right-handed 310
Helix 95
95
D
557 564Right-handed alpha
Helix 96
96
D
570 580Right-handed alpha
Helix 97
97
D
582 591Right-handed alpha
Helix 98
98
D
596 603Right-handed alpha
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There are 8 sheets in PDB entry 3W0L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 57first strand
Strand 2
A
243 247anti-parallel
Strand 3
A
223 230anti-parallel
Strand 4
A
213 219anti-parallel
Strand 5
A
395 402parallel
Strand 6
A
427 433parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 102first strand
Strand 2
A
76 86anti-parallel
Strand 3
A
67 73anti-parallel
Strand 4
A
139 142parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 138first strand
Strand 2
B
100 106parallel
Strand 3
B
172 178parallel
Strand 4
B
201 206parallel
Strand 5
B
243 245parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 364first strand
Strand 2
B
329 334parallel
Strand 3
B
404 410parallel
Strand 4
B
432 439parallel
Strand 5
B
455 460parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 102first strand
Strand 2
C
76 86anti-parallel
Strand 3
C
67 71anti-parallel
Strand 4
C
139 141parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
243 247first strand
Strand 2
C
223 230anti-parallel
Strand 3
C
213 219anti-parallel
Strand 4
C
395 402parallel
Strand 5
C
427 433parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 138first strand
Strand 2
D
100 106parallel
Strand 3
D
172 178parallel
Strand 4
D
201 206parallel
Strand 5
D
243 245parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
359 364first strand
Strand 2
D
329 334parallel
Strand 3
D
404 410parallel
Strand 4
D
432 439parallel
Strand 5
D
455 460parallel
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