Analysis of interatomic Contacts of Structural Units in PDB entry:
3W1I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3W1I entry

There are 7 chains in PDB entry 3W1I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 61	ASP 284
A	LEU 286	ILE 452
B	MSE 65	ASP 284
B	LEU 286	ILE 452
C	MSE 61	ASP 284
C	LEU 286	ILE 452
D	LEU 64	GLY 164

There are171 helices in PDB entry 3W1I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	90	103	Right-handed alpha
Helix 2	2	A	120	132	Right-handed alpha
Helix 3	3	A	141	154	Right-handed alpha
Helix 4	4	A	175	183	Right-handed alpha
Helix 5	5	A	196	202	Right-handed alpha
Helix 6	6	A	229	241	Right-handed alpha
Helix 7	7	A	255	260	Right-handed 310
Helix 8	8	A	267	273	Right-handed alpha
Helix 9	9	A	298	307	Right-handed alpha
Helix 10	10	A	308	313	Right-handed 310
Helix 11	11	A	317	333	Right-handed alpha
Helix 12	12	A	335	338	Right-handed 310
Helix 13	13	A	339	346	Right-handed alpha
Helix 14	14	A	348	364	Right-handed alpha
Helix 15	15	A	403	413	Right-handed alpha
Helix 16	16	A	432	434	Right-handed 310
Helix 17	17	A	437	451	Right-handed alpha
Helix 18	18	B	90	103	Right-handed alpha
Helix 19	19	B	120	132	Right-handed alpha
Helix 20	20	B	141	155	Right-handed alpha
Helix 21	21	B	175	183	Right-handed alpha
Helix 22	22	B	196	203	Right-handed alpha
Helix 23	23	B	229	241	Right-handed alpha
Helix 24	24	B	255	260	Right-handed 310
Helix 25	25	B	267	274	Right-handed alpha
Helix 26	26	B	298	308	Right-handed alpha
Helix 27	27	B	309	314	Right-handed alpha
Helix 28	28	B	317	333	Right-handed alpha
Helix 29	29	B	335	338	Right-handed 310
Helix 30	30	B	339	347	Right-handed alpha
Helix 31	31	B	348	364	Right-handed alpha
Helix 32	32	B	403	413	Right-handed alpha
Helix 33	33	B	432	434	Right-handed 310
Helix 34	34	B	435	451	Right-handed alpha
Helix 35	35	C	62	66	Right-handed 310
Helix 36	36	C	90	102	Right-handed alpha
Helix 37	37	C	119	132	Right-handed alpha
Helix 38	38	C	141	154	Right-handed alpha
Helix 39	39	C	175	183	Right-handed alpha
Helix 40	40	C	196	203	Right-handed alpha
Helix 41	41	C	229	241	Right-handed alpha
Helix 42	42	C	255	260	Right-handed 310
Helix 43	43	C	267	273	Right-handed alpha
Helix 44	44	C	298	308	Right-handed alpha
Helix 45	45	C	309	313	Right-handed 310
Helix 46	46	C	317	333	Right-handed alpha
Helix 47	47	C	335	338	Right-handed 310
Helix 48	48	C	339	347	Right-handed alpha
Helix 49	49	C	348	364	Right-handed alpha
Helix 50	50	C	403	413	Right-handed alpha
Helix 51	51	C	432	434	Right-handed 310
Helix 52	52	C	435	451	Right-handed alpha
Helix 53	53	D	90	103	Right-handed alpha
Helix 54	54	D	120	132	Right-handed alpha
Helix 55	55	D	141	155	Right-handed alpha
Helix 56	56	D	175	183	Right-handed alpha
Helix 57	57	D	196	203	Right-handed alpha
Helix 58	58	D	229	241	Right-handed alpha
Helix 59	59	D	255	260	Right-handed 310
Helix 60	60	D	267	274	Right-handed alpha
Helix 61	61	D	298	308	Right-handed alpha
Helix 62	62	D	309	314	Right-handed alpha
Helix 63	63	D	317	333	Right-handed alpha
Helix 64	64	D	335	338	Right-handed 310
Helix 65	65	D	339	347	Right-handed alpha
Helix 66	66	D	348	364	Right-handed alpha
Helix 67	67	D	403	413	Right-handed alpha
Helix 68	68	D	432	434	Right-handed 310
Helix 69	69	D	438	451	Right-handed alpha
Helix 70	70	E	90	103	Right-handed alpha
Helix 71	71	E	120	132	Right-handed alpha
Helix 72	72	E	141	154	Right-handed alpha
Helix 73	73	E	175	183	Right-handed alpha
Helix 74	74	E	196	203	Right-handed alpha
Helix 75	75	E	229	241	Right-handed alpha
Helix 76	76	E	255	260	Right-handed 310
Helix 77	77	E	267	274	Right-handed alpha
Helix 78	78	E	298	307	Right-handed alpha
Helix 79	79	E	309	314	Right-handed alpha
Helix 80	80	E	317	333	Right-handed alpha
Helix 81	81	E	335	338	Right-handed 310
Helix 82	82	E	339	347	Right-handed alpha
Helix 83	83	E	348	364	Right-handed alpha
Helix 84	84	E	403	413	Right-handed alpha
Helix 85	85	E	432	434	Right-handed 310
Helix 86	86	E	435	451	Right-handed alpha
Helix 87	87	F	90	103	Right-handed alpha
Helix 88	88	F	120	132	Right-handed alpha
Helix 89	89	F	141	155	Right-handed alpha
Helix 90	90	F	175	183	Right-handed alpha
Helix 91	91	F	196	202	Right-handed alpha
Helix 92	92	F	229	241	Right-handed alpha
Helix 93	93	F	255	260	Right-handed 310
Helix 94	94	F	267	274	Right-handed alpha
Helix 95	95	F	298	307	Right-handed alpha
Helix 96	96	F	309	314	Right-handed alpha
Helix 97	97	F	317	333	Right-handed alpha
Helix 98	98	F	335	338	Right-handed 310
Helix 99	99	F	339	346	Right-handed alpha
Helix 100	100	F	348	364	Right-handed alpha
Helix 101	101	F	403	413	Right-handed alpha
Helix 102	102	F	432	434	Right-handed 310
Helix 103	103	F	435	451	Right-handed alpha
Helix 104	104	G	90	103	Right-handed alpha
Helix 105	105	G	120	132	Right-handed alpha
Helix 106	106	G	141	154	Right-handed alpha
Helix 107	107	G	175	182	Right-handed alpha
Helix 108	108	G	196	204	Right-handed alpha
Helix 109	109	G	229	241	Right-handed alpha
Helix 110	110	G	255	260	Right-handed 310
Helix 111	111	G	267	274	Right-handed alpha
Helix 112	112	G	298	307	Right-handed alpha
Helix 113	113	G	309	314	Right-handed alpha
Helix 114	114	G	317	333	Right-handed alpha
Helix 115	115	G	335	338	Right-handed 310
Helix 116	116	G	339	347	Right-handed alpha
Helix 117	117	G	348	364	Right-handed alpha
Helix 118	118	G	403	413	Right-handed alpha
Helix 119	119	G	432	434	Right-handed 310
Helix 120	120	G	437	451	Right-handed alpha
Helix 121	121	H	90	103	Right-handed alpha
Helix 122	122	H	120	132	Right-handed alpha
Helix 123	123	H	141	154	Right-handed alpha
Helix 124	124	H	175	183	Right-handed alpha
Helix 125	125	H	196	203	Right-handed alpha
Helix 126	126	H	229	241	Right-handed alpha
Helix 127	127	H	255	260	Right-handed 310
Helix 128	128	H	267	274	Right-handed alpha
Helix 129	129	H	298	307	Right-handed alpha
Helix 130	130	H	309	314	Right-handed alpha
Helix 131	131	H	317	333	Right-handed alpha
Helix 132	132	H	335	338	Right-handed 310
Helix 133	133	H	339	347	Right-handed alpha
Helix 134	134	H	348	364	Right-handed alpha
Helix 135	135	H	403	414	Right-handed alpha
Helix 136	136	H	432	434	Right-handed 310
Helix 137	137	H	435	451	Right-handed alpha
Helix 138	138	I	90	102	Right-handed alpha
Helix 139	139	I	119	132	Right-handed alpha
Helix 140	140	I	141	154	Right-handed alpha
Helix 141	141	I	175	183	Right-handed alpha
Helix 142	142	I	196	203	Right-handed alpha
Helix 143	143	I	229	241	Right-handed alpha
Helix 144	144	I	255	260	Right-handed 310
Helix 145	145	I	267	274	Right-handed alpha
Helix 146	146	I	298	307	Right-handed alpha
Helix 147	147	I	309	314	Right-handed alpha
Helix 148	148	I	317	333	Right-handed alpha
Helix 149	149	I	335	338	Right-handed 310
Helix 150	150	I	339	347	Right-handed alpha
Helix 151	151	I	348	364	Right-handed alpha
Helix 152	152	I	403	413	Right-handed alpha
Helix 153	153	I	432	434	Right-handed 310
Helix 154	154	I	435	451	Right-handed alpha
Helix 155	155	J	90	103	Right-handed alpha
Helix 156	156	J	120	132	Right-handed alpha
Helix 157	157	J	141	154	Right-handed alpha
Helix 158	158	J	175	183	Right-handed alpha
Helix 159	159	J	196	203	Right-handed alpha
Helix 160	160	J	229	241	Right-handed alpha
Helix 161	161	J	255	260	Right-handed 310
Helix 162	162	J	267	274	Right-handed alpha
Helix 163	163	J	298	308	Right-handed alpha
Helix 164	164	J	309	314	Right-handed alpha
Helix 165	165	J	317	333	Right-handed alpha
Helix 166	166	J	335	338	Right-handed 310
Helix 167	167	J	339	346	Right-handed alpha
Helix 168	168	J	348	364	Right-handed alpha
Helix 169	169	J	403	413	Right-handed alpha
Helix 170	170	J	432	434	Right-handed 310
Helix 171	171	J	435	451	Right-handed alpha

There are 40 sheets in PDB entry 3W1I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	419	first strand
Strand 2	A	71	74	parallel
Strand 3	B	104	105	anti-parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	139	first strand
Strand 2	A	293	297	anti-parallel
Strand 3	A	278	282	anti-parallel
Strand 4	A	244	249	parallel
Strand 5	A	208	214	parallel
Strand 6	A	158	162	parallel
Strand 7	A	185	189	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	169	first strand
Strand 2	A	173	174	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	223	first strand
Strand 2	J	219	223	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	378	first strand
Strand 2	A	390	399	anti-parallel
Strand 3	A	426	430	anti-parallel
Strand 4	A	421	423	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	74	first strand
Strand 2	B	418	419	parallel

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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	139	first strand
Strand 2	B	293	297	anti-parallel
Strand 3	B	278	282	anti-parallel
Strand 4	B	244	247	parallel
Strand 5	B	208	214	parallel
Strand 6	B	158	162	parallel
Strand 7	B	185	189	parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	169	first strand
Strand 2	B	173	174	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	223	first strand
Strand 2	C	219	223	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	378	first strand
Strand 2	B	390	399	anti-parallel
Strand 3	B	426	430	anti-parallel
Strand 4	B	421	423	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	75	first strand
Strand 2	C	418	423	parallel
Strand 3	C	426	430	anti-parallel
Strand 4	C	390	399	anti-parallel
Strand 5	C	369	378	anti-parallel

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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	139	first strand
Strand 2	C	293	297	anti-parallel
Strand 3	C	278	282	anti-parallel
Strand 4	C	244	249	parallel
Strand 5	C	208	214	parallel
Strand 6	C	158	162	parallel
Strand 7	C	185	189	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	169	first strand
Strand 2	C	173	174	anti-parallel

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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	75	first strand
Strand 2	D	418	423	parallel
Strand 3	D	426	430	anti-parallel
Strand 4	D	390	399	anti-parallel
Strand 5	D	369	378	anti-parallel

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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	293	297	anti-parallel
Strand 3	D	278	282	anti-parallel
Strand 4	D	244	249	parallel
Strand 5	D	208	214	parallel
Strand 6	D	158	162	parallel
Strand 7	D	185	189	parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	169	first strand
Strand 2	D	173	174	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	223	first strand
Strand 2	E	219	223	anti-parallel

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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	369	378	first strand
Strand 2	E	390	399	anti-parallel
Strand 3	E	427	430	anti-parallel
Strand 4	E	418	422	anti-parallel
Strand 5	E	71	75	parallel
Strand 6	F	104	105	anti-parallel

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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	139	first strand
Strand 2	E	293	297	anti-parallel
Strand 3	E	278	282	anti-parallel
Strand 4	E	244	249	parallel
Strand 5	E	208	214	parallel
Strand 6	E	158	162	parallel
Strand 7	E	185	189	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	169	first strand
Strand 2	E	173	174	anti-parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	73	75	first strand
Strand 2	F	418	423	parallel
Strand 3	F	426	430	anti-parallel
Strand 4	F	390	399	anti-parallel
Strand 5	F	369	378	anti-parallel

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There are 7 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	139	first strand
Strand 2	F	293	297	anti-parallel
Strand 3	F	278	282	anti-parallel
Strand 4	F	244	249	parallel
Strand 5	F	208	214	parallel
Strand 6	F	158	162	parallel
Strand 7	F	185	189	parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	169	first strand
Strand 2	F	173	174	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	219	223	first strand
Strand 2	G	219	223	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	73	75	first strand
Strand 2	G	418	422	parallel
Strand 3	G	427	430	anti-parallel
Strand 4	G	394	399	anti-parallel
Strand 5	G	369	371	anti-parallel

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There are 7 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	139	first strand
Strand 2	G	293	297	anti-parallel
Strand 3	G	278	282	anti-parallel
Strand 4	G	244	249	parallel
Strand 5	G	208	214	parallel
Strand 6	G	158	162	parallel
Strand 7	G	185	189	parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	168	169	first strand
Strand 2	G	173	174	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	376	378	first strand
Strand 2	G	390	392	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	73	75	first strand
Strand 2	H	418	423	parallel
Strand 3	H	426	430	anti-parallel
Strand 4	H	390	399	anti-parallel
Strand 5	H	369	378	anti-parallel

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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	293	297	anti-parallel
Strand 3	H	278	282	anti-parallel
Strand 4	H	244	249	parallel
Strand 5	H	208	214	parallel
Strand 6	H	158	162	parallel
Strand 7	H	185	189	parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	168	169	first strand
Strand 2	H	173	174	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	219	223	first strand
Strand 2	I	219	223	anti-parallel

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There are 6 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	369	378	first strand
Strand 2	I	390	399	anti-parallel
Strand 3	I	426	430	anti-parallel
Strand 4	I	418	423	anti-parallel
Strand 5	I	71	75	parallel
Strand 6	J	104	105	anti-parallel

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There are 7 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	135	139	first strand
Strand 2	I	293	297	anti-parallel
Strand 3	I	278	282	anti-parallel
Strand 4	I	244	249	parallel
Strand 5	I	208	214	parallel
Strand 6	I	158	162	parallel
Strand 7	I	185	189	parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	168	169	first strand
Strand 2	I	173	174	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	73	74	first strand
Strand 2	J	418	419	parallel

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There are 7 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	135	139	first strand
Strand 2	J	293	297	anti-parallel
Strand 3	J	278	282	anti-parallel
Strand 4	J	244	249	parallel
Strand 5	J	208	214	parallel
Strand 6	J	158	162	parallel
Strand 7	J	185	189	parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	168	169	first strand
Strand 2	J	173	174	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	369	371	first strand
Strand 2	J	390	399	anti-parallel
Strand 3	J	374	378	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	369	371	first strand
Strand 2	J	390	399	anti-parallel
Strand 3	J	426	430	anti-parallel
Strand 4	J	421	423	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3W1I

Analysis of interatomic Contacts of Structural Units in PDB entry:
3W1I