Analysis of interatomic Contacts of Structural Units in PDB entry:
3W36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W36 entry

There are 2 chains in PDB entry 3W36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 54GLY 523
B
 GLU 55VAL 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3W36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 67Right-handed alpha
Helix 2
2
A
70 74Right-handed 310
Helix 3
3
A
87 107Right-handed alpha
Helix 4
4
A
124 129Right-handed 310
Helix 5
5
A
131 150Right-handed alpha
Helix 6
6
A
153 164Right-handed alpha
Helix 7
7
A
177 194Right-handed alpha
Helix 8
8
A
242 244Right-handed 310
Helix 9
9
A
263 269Right-handed 310
Helix 10
10
A
276 280Right-handed 310
Helix 11
11
A
285 289Right-handed 310
Helix 12
12
A
292 309Right-handed alpha
Helix 13
13
A
311 323Right-handed alpha
Helix 14
14
A
326 339Right-handed alpha
Helix 15
15
A
345 376Right-handed alpha
Helix 16
16
A
379 389Right-handed alpha
Helix 17
17
A
409 411Right-handed 310
Helix 18
18
A
425 443Right-handed alpha
Helix 19
19
A
477 491Right-handed alpha
Helix 20
20
A
495 523Right-handed alpha
Helix 21
21
B
62 68Right-handed alpha
Helix 22
22
B
70 74Right-handed 310
Helix 23
23
B
87 107Right-handed alpha
Helix 24
24
B
108 110Right-handed 310
Helix 25
25
B
124 129Right-handed 310
Helix 26
26
B
131 150Right-handed alpha
Helix 27
27
B
153 164Right-handed alpha
Helix 28
28
B
177 194Right-handed alpha
Helix 29
29
B
242 244Right-handed 310
Helix 30
30
B
263 269Right-handed 310
Helix 31
31
B
276 280Right-handed 310
Helix 32
32
B
285 289Right-handed 310
Helix 33
33
B
292 309Right-handed alpha
Helix 34
34
B
311 323Right-handed alpha
Helix 35
35
B
326 339Right-handed alpha
Helix 36
36
B
345 376Right-handed alpha
Helix 37
37
B
379 389Right-handed alpha
Helix 38
38
B
409 411Right-handed 310
Helix 39
39
B
425 443Right-handed alpha
Helix 40
40
B
477 491Right-handed alpha
Helix 41
41
B
495 523Right-handed alpha
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There are 5 sheets in PDB entry 3W36. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 240first strand
Strand 2
A
256 259anti-parallel
Strand 3
B
256 259anti-parallel
Strand 4
B
238 240anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 396first strand
Strand 2
A
403 407anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 453first strand
Strand 2
A
470 476anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
392 396first strand
Strand 2
B
403 407anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
446 453first strand
Strand 2
B
470 476anti-parallel
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