Analysis of interatomic Contacts of Structural Units in PDB entry:
3W4Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W4Y entry

There are 3 chains in PDB entry 3W4Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 76ASP 188
B
 SER 71ASP 188
C
 GLY 70ASP 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3W4Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
86 104Right-handed alpha
Helix 2
2
A
110 128Right-handed alpha
Helix 3
3
A
130 144Right-handed alpha
Helix 4
4
A
150 169Right-handed alpha
Helix 5
5
A
175 177Right-handed 310
Helix 6
6
A
178 184Right-handed alpha
Helix 7
7
B
86 104Right-handed alpha
Helix 8
8
B
110 128Right-handed alpha
Helix 9
9
B
130 144Right-handed alpha
Helix 10
10
B
150 169Right-handed alpha
Helix 11
11
B
175 177Right-handed 310
Helix 12
12
B
178 184Right-handed alpha
Helix 13
13
C
86 104Right-handed alpha
Helix 14
14
C
110 128Right-handed alpha
Helix 15
15
C
130 144Right-handed alpha
Helix 16
16
C
150 170Right-handed alpha
Helix 17
17
C
175 177Right-handed 310
Helix 18
18
C
178 184Right-handed alpha
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There are no sheets in PDB entry 3W4Y
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il