Analysis of interatomic Contacts of Structural Units in PDB entry:
3W5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W5A entry

There are 3 chains in PDB entry 3W5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 994
B
 MET 1GLY 994
C
 MET 1TYR 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 3W5A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 17Right-handed alpha
Helix 2
2
A
25 36Right-handed alpha
Helix 3
3
A
48 57Right-handed alpha
Helix 4
4
A
59 68Right-handed alpha
Helix 5
5
A
70 78Right-handed alpha
Helix 6
6
A
85 90Right-handed alpha
Helix 7
7
A
90 118Right-handed alpha
Helix 8
8
A
143 145Right-handed 310
Helix 9
9
A
177 182Right-handed alpha
Helix 10
10
A
200 204Right-handed 310
Helix 11
11
A
226 230Right-handed 310
Helix 12
12
A
247 275Right-handed alpha
Helix 13
13
A
281 285Right-handed 310
Helix 14
14
A
287 307Right-handed alpha
Helix 15
15
A
310 329Right-handed alpha
Helix 16
16
A
335 345Right-handed alpha
Helix 17
17
A
403 406Right-handed 310
Helix 18
18
A
407 420Right-handed alpha
Helix 19
19
A
439 453Right-handed alpha
Helix 20
20
A
466 468Right-handed 310
Helix 21
21
A
469 478Right-handed alpha
Helix 22
22
A
517 524Right-handed alpha
Helix 23
23
A
538 555Right-handed alpha
Helix 24
24
A
580 582Right-handed 310
Helix 25
25
A
583 588Right-handed alpha
Helix 26
26
A
606 617Right-handed alpha
Helix 27
27
A
628 639Right-handed alpha
Helix 28
28
A
655 661Right-handed alpha
Helix 29
29
A
662 671Right-handed alpha
Helix 30
30
A
681 693Right-handed alpha
Helix 31
31
A
704 706Right-handed 310
Helix 32
32
A
707 714Right-handed alpha
Helix 33
33
A
724 731Right-handed alpha
Helix 34
34
A
739 781Right-handed alpha
Helix 35
35
A
788 800Right-handed alpha
Helix 36
36
A
802 807Right-handed alpha
Helix 37
37
A
808 810Right-handed 310
Helix 38
38
A
814 818Right-handed 310
Helix 39
39
A
830 857Right-handed alpha
Helix 40
40
A
887 893Right-handed 310
Helix 41
41
A
895 915Right-handed alpha
Helix 42
42
A
926 929Right-handed 310
Helix 43
43
A
930 950Right-handed alpha
Helix 44
44
A
951 957Right-handed alpha
Helix 45
45
A
963 975Right-handed alpha
Helix 46
46
A
975 991Right-handed alpha
Helix 47
47
B
8 17Right-handed alpha
Helix 48
48
B
25 36Right-handed alpha
Helix 49
49
B
48 57Right-handed alpha
Helix 50
50
B
59 75Right-handed alpha
Helix 51
51
B
85 118Right-handed alpha
Helix 52
52
B
119 123Right-handed 310
Helix 53
53
B
143 145Right-handed 310
Helix 54
54
B
177 182Right-handed alpha
Helix 55
55
B
200 204Right-handed 310
Helix 56
56
B
226 230Right-handed 310
Helix 57
57
B
247 274Right-handed alpha
Helix 58
58
B
275 279Right-handed 310
Helix 59
59
B
281 285Right-handed 310
Helix 60
60
B
287 307Right-handed alpha
Helix 61
61
B
310 329Right-handed alpha
Helix 62
62
B
337 344Right-handed alpha
Helix 63
63
B
403 406Right-handed 310
Helix 64
64
B
407 420Right-handed alpha
Helix 65
65
B
439 453Right-handed alpha
Helix 66
66
B
463 468Right-handed alpha
Helix 67
67
B
469 478Right-handed alpha
Helix 68
68
B
517 524Right-handed alpha
Helix 69
69
B
538 555Right-handed alpha
Helix 70
70
B
580 582Right-handed 310
Helix 71
71
B
583 588Right-handed alpha
Helix 72
72
B
606 618Right-handed alpha
Helix 73
73
B
628 639Right-handed alpha
Helix 74
74
B
655 661Right-handed alpha
Helix 75
75
B
662 671Right-handed alpha
Helix 76
76
B
680 693Right-handed alpha
Helix 77
77
B
704 706Right-handed 310
Helix 78
78
B
707 714Right-handed alpha
Helix 79
79
B
724 731Right-handed alpha
Helix 80
80
B
739 781Right-handed alpha
Helix 81
81
B
788 800Right-handed alpha
Helix 82
82
B
802 807Right-handed alpha
Helix 83
83
B
808 810Right-handed 310
Helix 84
84
B
814 818Right-handed 310
Helix 85
85
B
830 855Right-handed alpha
Helix 86
86
B
887 893Right-handed 310
Helix 87
87
B
895 915Right-handed alpha
Helix 88
88
B
926 929Right-handed 310
Helix 89
89
B
930 950Right-handed alpha
Helix 90
90
B
951 957Right-handed alpha
Helix 91
91
B
963 975Right-handed alpha
Helix 92
92
B
975 991Right-handed alpha
Helix 93
93
C
3 31Right-handed alpha
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There are 12 sheets in PDB entry 3W5A. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
126 130anti-parallel
Strand 3
A
150 154anti-parallel
Strand 4
A
218 225anti-parallel
Strand 5
A
162 167anti-parallel
Strand 6
A
207 208anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 188first strand
Strand 2
A
174 176anti-parallel
Strand 3
A
213 216anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 333first strand
Strand 2
A
733 735anti-parallel
Strand 3
A
716 720parallel
Strand 4
A
698 702parallel
Strand 5
A
347 351parallel
Strand 6
A
620 625parallel
Strand 7
A
675 677parallel
Strand 8
A
652 654parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
395 397anti-parallel
Strand 3
A
376 384anti-parallel
Strand 4
A
362 373anti-parallel
Strand 5
A
591 600anti-parallel
Strand 6
A
560 567anti-parallel
Strand 7
A
511 516anti-parallel
Strand 8
A
493 500anti-parallel
Strand 9
A
479 485anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
395 397anti-parallel
Strand 3
A
376 384anti-parallel
Strand 4
A
362 373anti-parallel
Strand 5
A
591 600anti-parallel
Strand 6
A
525 530parallel
Strand 7
A
533 536anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
434 437anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 141first strand
Strand 2
B
126 130anti-parallel
Strand 3
B
150 154anti-parallel
Strand 4
B
218 225anti-parallel
Strand 5
B
162 167anti-parallel
Strand 6
B
207 208anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 188first strand
Strand 2
B
174 176anti-parallel
Strand 3
B
213 216anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 332first strand
Strand 2
B
733 735anti-parallel
Strand 3
B
716 720parallel
Strand 4
B
698 702parallel
Strand 5
B
347 351parallel
Strand 6
B
620 625parallel
Strand 7
B
675 677parallel
Strand 8
B
652 654parallel
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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 401first strand
Strand 2
B
395 397anti-parallel
Strand 3
B
376 384anti-parallel
Strand 4
B
362 373anti-parallel
Strand 5
B
591 600anti-parallel
Strand 6
B
560 567anti-parallel
Strand 7
B
511 516anti-parallel
Strand 8
B
493 500anti-parallel
Strand 9
B
479 485anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 401first strand
Strand 2
B
395 397anti-parallel
Strand 3
B
376 384anti-parallel
Strand 4
B
362 373anti-parallel
Strand 5
B
591 600anti-parallel
Strand 6
B
525 530parallel
Strand 7
B
533 536anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
424 427first strand
Strand 2
B
434 437anti-parallel
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