Analysis of interatomic Contacts of Structural Units in PDB entry:
3W8H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W8H entry

There are 2 chains in PDB entry 3W8H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 15VAL 211
B
 GLU -2ASN 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3W8H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 33Right-handed alpha
Helix 2
2
A
37 55Right-handed alpha
Helix 3
3
A
57 70Right-handed alpha
Helix 4
4
A
75 84Right-handed alpha
Helix 5
5
A
88 92Right-handed 310
Helix 6
6
A
97 115Right-handed alpha
Helix 7
7
A
116 121Right-handed alpha
Helix 8
8
A
123 149Right-handed alpha
Helix 9
9
A
159 185Right-handed alpha
Helix 10
10
A
186 210Right-handed alpha
Helix 11
11
B
356 361Right-handed alpha
Helix 12
12
B
361 375Right-handed alpha
Helix 13
13
B
380 397Right-handed alpha
Helix 14
14
B
399 415Right-handed alpha
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There are no sheets in PDB entry 3W8H
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il