Analysis of interatomic Contacts of Structural Units in PDB entry:
3W9Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W9Z entry

There is 1 chain in PDB entry 3W9Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3W9Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
42 50Right-handed alpha
Helix 3
3
A
51 56Right-handed 310
Helix 4
4
A
73 87Right-handed alpha
Helix 5
5
A
115 130Right-handed alpha
Helix 6
6
A
149 160Right-handed alpha
Helix 7
7
A
177 181Right-handed 310
Helix 8
8
A
182 193Right-handed alpha
Helix 9
9
A
205 217Right-handed alpha
Helix 10
10
A
225 230Right-handed alpha
Helix 11
11
A
232 240Right-handed alpha
Helix 12
12
A
245 259Right-handed alpha
Helix 13
13
A
271 281Right-handed alpha
Helix 14
14
A
282 284Right-handed 310
Helix 15
15
A
285 295Right-handed alpha
Helix 16
16
A
302 310Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3W9Z.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
28 35parallel
Strand 3
A
65 70parallel
Strand 4
A
92 96parallel
Strand 5
A
136 141parallel
Strand 6
A
164 168parallel
Strand 7
A
197 200parallel
Strand 8
A
220 223parallel
Strand 9
A
2 5parallel
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