Analysis of interatomic Contacts of Structural Units in PDB entry:
3WAG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WAG entry

There are 2 chains in PDB entry 3WAG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 416
B
 MET 1SER 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 3WAG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 27Right-handed alpha
Helix 2
2
A
36 38Right-handed 310
Helix 3
3
A
39 46Right-handed alpha
Helix 4
4
A
88 107Right-handed alpha
Helix 5
5
A
108 123Right-handed alpha
Helix 6
6
A
134 143Right-handed alpha
Helix 7
7
A
155 170Right-handed alpha
Helix 8
8
A
178 189Right-handed alpha
Helix 9
9
A
190 192Right-handed 310
Helix 10
10
A
197 202Right-handed alpha
Helix 11
11
A
210 214Right-handed 310
Helix 12
12
A
236 241Right-handed 310
Helix 13
13
A
252 259Right-handed alpha
Helix 14
14
A
265 275Right-handed alpha
Helix 15
15
A
285 291Right-handed alpha
Helix 16
16
A
306 311Right-handed alpha
Helix 17
17
A
322 332Right-handed alpha
Helix 18
18
A
345 356Right-handed alpha
Helix 19
19
A
363 367Right-handed 310
Helix 20
20
A
368 382Right-handed alpha
Helix 21
21
A
382 398Right-handed alpha
Helix 22
22
A
401 416Right-handed alpha
Helix 23
23
B
10 27Right-handed alpha
Helix 24
24
B
36 38Right-handed 310
Helix 25
25
B
39 45Right-handed alpha
Helix 26
26
B
83 87Right-handed 310
Helix 27
27
B
88 107Right-handed alpha
Helix 28
28
B
108 123Right-handed alpha
Helix 29
29
B
134 142Right-handed alpha
Helix 30
30
B
155 169Right-handed alpha
Helix 31
31
B
178 189Right-handed alpha
Helix 32
32
B
190 192Right-handed 310
Helix 33
33
B
196 202Right-handed alpha
Helix 34
34
B
210 214Right-handed 310
Helix 35
35
B
236 241Right-handed alpha
Helix 36
36
B
252 257Right-handed alpha
Helix 37
37
B
265 275Right-handed alpha
Helix 38
38
B
285 293Right-handed alpha
Helix 39
39
B
306 311Right-handed alpha
Helix 40
40
B
322 332Right-handed alpha
Helix 41
41
B
345 356Right-handed alpha
Helix 42
42
B
363 367Right-handed 310
Helix 43
43
B
368 382Right-handed alpha
Helix 44
44
B
383 398Right-handed alpha
Helix 45
45
B
401 416Right-handed alpha
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There are 4 sheets in PDB entry 3WAG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 206first strand
Strand 2
A
147 150parallel
Strand 3
A
126 130parallel
Strand 4
A
2 6parallel
Strand 5
A
30 35parallel
Strand 6
A
49 52parallel
Strand 7
B
233 234parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
B
49 52parallel
Strand 3
B
30 35parallel
Strand 4
B
2 6parallel
Strand 5
B
126 130parallel
Strand 6
B
147 150parallel
Strand 7
B
204 206parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 302first strand
Strand 2
A
279 283parallel
Strand 3
A
247 251parallel
Strand 4
A
314 319parallel
Strand 5
A
336 338parallel
Strand 6
A
359 361parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 302first strand
Strand 2
B
279 283parallel
Strand 3
B
247 251parallel
Strand 4
B
314 319parallel
Strand 5
B
336 338parallel
Strand 6
B
359 361parallel
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