Analysis of interatomic Contacts of Structural Units in PDB entry:
3WB8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WB8 entry

There are 4 chains in PDB entry 3WB8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1471VAL 1853
B
 ASP 1470VAL 1853
C
 PHE 1471VAL 1853
D
 ASP 1470PHE 1669
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are163 helices in PDB entry 3WB8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1478 1480Right-handed 310
Helix 2
2
A
1481 1490Right-handed alpha
Helix 3
3
A
1497 1503Right-handed alpha
Helix 4
4
A
1505 1521Right-handed alpha
Helix 5
5
A
1523 1546Right-handed alpha
Helix 6
6
A
1548 1569Right-handed alpha
Helix 7
7
A
1572 1576Right-handed 310
Helix 8
8
A
1580 1586Right-handed alpha
Helix 9
9
A
1593 1620Right-handed alpha
Helix 10
10
A
1622 1628Right-handed alpha
Helix 11
11
A
1658 1677Right-handed alpha
Helix 12
12
A
1679 1705Right-handed alpha
Helix 13
13
A
1706 1709Right-handed 310
Helix 14
14
A
1710 1731Right-handed alpha
Helix 15
15
A
1737 1754Right-handed alpha
Helix 16
16
A
1758 1769Right-handed alpha
Helix 17
17
A
1773 1784Right-handed alpha
Helix 18
18
A
1795 1806Right-handed alpha
Helix 19
19
A
1835 1839Right-handed 310
Helix 20
20
A
1842 1846Right-handed 310
Helix 21
21
B
1478 1480Right-handed 310
Helix 22
22
B
1481 1490Right-handed alpha
Helix 23
23
B
1497 1503Right-handed alpha
Helix 24
24
B
1505 1521Right-handed alpha
Helix 25
25
B
1523 1546Right-handed alpha
Helix 26
26
B
1548 1569Right-handed alpha
Helix 27
27
B
1572 1576Right-handed 310
Helix 28
28
B
1580 1586Right-handed alpha
Helix 29
29
B
1593 1620Right-handed alpha
Helix 30
30
B
1622 1628Right-handed alpha
Helix 31
31
B
1658 1676Right-handed alpha
Helix 32
32
B
1679 1703Right-handed alpha
Helix 33
33
B
1704 1709Right-handed 310
Helix 34
34
B
1710 1731Right-handed alpha
Helix 35
35
B
1737 1742Right-handed alpha
Helix 36
36
B
1742 1754Right-handed alpha
Helix 37
37
B
1773 1784Right-handed alpha
Helix 38
38
B
1796 1806Right-handed alpha
Helix 39
39
B
1835 1839Right-handed 310
Helix 40
40
B
1842 1846Right-handed 310
Helix 41
41
C
1478 1480Right-handed 310
Helix 42
42
C
1481 1490Right-handed alpha
Helix 43
43
C
1497 1503Right-handed alpha
Helix 44
44
C
1505 1522Right-handed alpha
Helix 45
45
C
1523 1546Right-handed alpha
Helix 46
46
C
1548 1569Right-handed alpha
Helix 47
47
C
1572 1576Right-handed 310
Helix 48
48
C
1580 1586Right-handed alpha
Helix 49
49
C
1593 1628Right-handed alpha
Helix 50
50
C
1658 1676Right-handed alpha
Helix 51
51
C
1679 1705Right-handed alpha
Helix 52
52
C
1706 1709Right-handed 310
Helix 53
53
C
1710 1731Right-handed alpha
Helix 54
54
C
1738 1741Right-handed 310
Helix 55
55
C
1742 1754Right-handed alpha
Helix 56
56
C
1758 1769Right-handed alpha
Helix 57
57
C
1773 1784Right-handed alpha
Helix 58
58
C
1795 1807Right-handed alpha
Helix 59
59
C
1835 1839Right-handed 310
Helix 60
60
C
1842 1846Right-handed 310
Helix 61
61
D
1478 1480Right-handed 310
Helix 62
62
D
1481 1490Right-handed alpha
Helix 63
63
D
1497 1503Right-handed alpha
Helix 64
64
D
1505 1521Right-handed alpha
Helix 65
65
D
1523 1546Right-handed alpha
Helix 66
66
D
1548 1569Right-handed alpha
Helix 67
67
D
1572 1576Right-handed 310
Helix 68
68
D
1580 1585Right-handed alpha
Helix 69
69
D
1593 1620Right-handed alpha
Helix 70
70
D
1622 1628Right-handed alpha
Helix 71
71
D
1658 1676Right-handed alpha
Helix 72
72
D
1679 1703Right-handed alpha
Helix 73
73
D
1705 1709Right-handed 310
Helix 74
74
D
1710 1731Right-handed alpha
Helix 75
75
D
1737 1742Right-handed alpha
Helix 76
76
D
1742 1754Right-handed alpha
Helix 77
77
D
1758 1769Right-handed alpha
Helix 78
78
D
1773 1784Right-handed alpha
Helix 79
79
D
1795 1806Right-handed alpha
Helix 80
80
D
1807 1810Right-handed 310
Helix 81
81
D
1835 1839Right-handed 310
Helix 82
82
D
1842 1846Right-handed 310
Helix 83
83
E
1478 1480Right-handed 310
Helix 84
84
E
1481 1490Right-handed alpha
Helix 85
85
E
1497 1503Right-handed alpha
Helix 86
86
E
1505 1521Right-handed alpha
Helix 87
87
E
1523 1546Right-handed alpha
Helix 88
88
E
1548 1569Right-handed alpha
Helix 89
89
E
1572 1576Right-handed 310
Helix 90
90
E
1580 1586Right-handed alpha
Helix 91
91
E
1593 1628Right-handed alpha
Helix 92
92
E
1658 1677Right-handed alpha
Helix 93
93
E
1679 1705Right-handed alpha
Helix 94
94
E
1706 1709Right-handed 310
Helix 95
95
E
1710 1731Right-handed alpha
Helix 96
96
E
1739 1741Right-handed 310
Helix 97
97
E
1742 1754Right-handed alpha
Helix 98
98
E
1758 1769Right-handed alpha
Helix 99
99
E
1773 1784Right-handed alpha
Helix 100
100
E
1795 1806Right-handed alpha
Helix 101
101
E
1807 1810Right-handed 310
Helix 102
102
E
1835 1839Right-handed 310
Helix 103
103
E
1842 1846Right-handed 310
Helix 104
104
F
1478 1480Right-handed 310
Helix 105
105
F
1481 1490Right-handed alpha
Helix 106
106
F
1497 1503Right-handed alpha
Helix 107
107
F
1505 1521Right-handed alpha
Helix 108
108
F
1523 1546Right-handed alpha
Helix 109
109
F
1548 1569Right-handed alpha
Helix 110
110
F
1572 1576Right-handed 310
Helix 111
111
F
1580 1586Right-handed alpha
Helix 112
112
F
1593 1628Right-handed alpha
Helix 113
113
F
1658 1677Right-handed alpha
Helix 114
114
F
1679 1705Right-handed alpha
Helix 115
115
F
1706 1709Right-handed 310
Helix 116
116
F
1710 1731Right-handed alpha
Helix 117
117
F
1737 1742Right-handed alpha
Helix 118
118
F
1742 1752Right-handed alpha
Helix 119
119
F
1758 1769Right-handed alpha
Helix 120
120
F
1773 1784Right-handed alpha
Helix 121
121
F
1795 1807Right-handed alpha
Helix 122
122
F
1835 1839Right-handed 310
Helix 123
123
F
1842 1846Right-handed 310
Helix 124
124
G
1478 1480Right-handed 310
Helix 125
125
G
1481 1490Right-handed alpha
Helix 126
126
G
1497 1503Right-handed alpha
Helix 127
127
G
1505 1521Right-handed alpha
Helix 128
128
G
1523 1546Right-handed alpha
Helix 129
129
G
1548 1569Right-handed alpha
Helix 130
130
G
1572 1576Right-handed 310
Helix 131
131
G
1580 1586Right-handed alpha
Helix 132
132
G
1593 1628Right-handed alpha
Helix 133
133
G
1658 1676Right-handed alpha
Helix 134
134
G
1679 1705Right-handed alpha
Helix 135
135
G
1706 1709Right-handed 310
Helix 136
136
G
1710 1731Right-handed alpha
Helix 137
137
G
1739 1741Right-handed 310
Helix 138
138
G
1742 1754Right-handed alpha
Helix 139
139
G
1758 1769Right-handed alpha
Helix 140
140
G
1773 1784Right-handed alpha
Helix 141
141
G
1795 1807Right-handed alpha
Helix 142
142
G
1835 1839Right-handed 310
Helix 143
143
G
1842 1846Right-handed 310
Helix 144
144
H
1478 1480Right-handed 310
Helix 145
145
H
1481 1490Right-handed alpha
Helix 146
146
H
1498 1503Right-handed alpha
Helix 147
147
H
1505 1521Right-handed alpha
Helix 148
148
H
1523 1545Right-handed alpha
Helix 149
149
H
1548 1569Right-handed alpha
Helix 150
150
H
1572 1576Right-handed 310
Helix 151
151
H
1580 1586Right-handed alpha
Helix 152
152
H
1593 1628Right-handed alpha
Helix 153
153
H
1658 1676Right-handed alpha
Helix 154
154
H
1679 1705Right-handed alpha
Helix 155
155
H
1706 1709Right-handed 310
Helix 156
156
H
1710 1731Right-handed alpha
Helix 157
157
H
1738 1741Right-handed 310
Helix 158
158
H
1742 1752Right-handed alpha
Helix 159
159
H
1758 1769Right-handed alpha
Helix 160
160
H
1773 1784Right-handed alpha
Helix 161
161
H
1796 1807Right-handed alpha
Helix 162
162
H
1835 1839Right-handed 310
Helix 163
163
H
1842 1846Right-handed 310
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There are 7 sheets in PDB entry 3WB8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1475 1476first strand
Strand 2
A
1851 1852anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1475 1476first strand
Strand 2
B
1851 1852anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1474 1476first strand
Strand 2
C
1851 1853anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1475 1476first strand
Strand 2
D
1851 1852anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1475 1476first strand
Strand 2
E
1851 1852anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
1475 1476first strand
Strand 2
F
1851 1852anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1475 1476first strand
Strand 2
G
1851 1852anti-parallel
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