Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WBH entry

There are 2 chains in PDB entry 3WBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2GLU 498
B
 GLU 2GLU 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3WBH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 29Right-handed alpha
Helix 2
2
A
39 48Right-handed alpha
Helix 3
3
A
64 75Right-handed alpha
Helix 4
4
A
94 102Right-handed alpha
Helix 5
5
A
116 121Right-handed alpha
Helix 6
6
A
131 143Right-handed alpha
Helix 7
7
A
151 155Right-handed 310
Helix 8
8
A
159 162Right-handed 310
Helix 9
9
A
163 171Right-handed alpha
Helix 10
10
A
185 193Right-handed alpha
Helix 11
11
A
200 207Right-handed alpha
Helix 12
12
A
223 231Right-handed alpha
Helix 13
13
A
240 253Right-handed alpha
Helix 14
14
A
266 274Right-handed alpha
Helix 15
15
A
276 299Right-handed alpha
Helix 16
16
A
334 338Right-handed 310
Helix 17
17
A
351 359Right-handed alpha
Helix 18
18
A
363 373Right-handed alpha
Helix 19
19
A
375 379Right-handed 310
Helix 20
20
A
380 392Right-handed alpha
Helix 21
21
A
397 406Right-handed alpha
Helix 22
22
A
431 435Right-handed 310
Helix 23
23
A
439 453Right-handed alpha
Helix 24
24
A
473 478Right-handed alpha
Helix 25
25
A
479 481Right-handed 310
Helix 26
26
A
486 498Right-handed alpha
Helix 27
27
B
15 29Right-handed alpha
Helix 28
28
B
39 48Right-handed alpha
Helix 29
29
B
64 75Right-handed alpha
Helix 30
30
B
94 102Right-handed alpha
Helix 31
31
B
116 121Right-handed alpha
Helix 32
32
B
131 143Right-handed alpha
Helix 33
33
B
151 155Right-handed 310
Helix 34
34
B
159 162Right-handed 310
Helix 35
35
B
163 171Right-handed alpha
Helix 36
36
B
185 193Right-handed alpha
Helix 37
37
B
200 207Right-handed alpha
Helix 38
38
B
223 231Right-handed alpha
Helix 39
39
B
240 253Right-handed alpha
Helix 40
40
B
267 274Right-handed alpha
Helix 41
41
B
276 299Right-handed alpha
Helix 42
42
B
334 338Right-handed 310
Helix 43
43
B
351 359Right-handed alpha
Helix 44
44
B
363 373Right-handed alpha
Helix 45
45
B
375 379Right-handed 310
Helix 46
46
B
380 392Right-handed alpha
Helix 47
47
B
397 406Right-handed alpha
Helix 48
48
B
431 435Right-handed 310
Helix 49
49
B
439 453Right-handed alpha
Helix 50
50
B
473 478Right-handed alpha
Helix 51
51
B
479 481Right-handed 310
Helix 52
52
B
486 498Right-handed alpha
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There are 8 sheets in PDB entry 3WBH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
212 215parallel
Strand 3
A
146 150parallel
Strand 4
A
105 113parallel
Strand 5
A
259 265parallel
Strand 6
A
5 13parallel
Strand 7
A
304 314parallel
Strand 8
A
461 462anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
212 215parallel
Strand 3
A
146 150parallel
Strand 4
A
105 113parallel
Strand 5
A
259 265parallel
Strand 6
A
5 13parallel
Strand 7
A
304 314parallel
Strand 8
A
466 471anti-parallel
Strand 9
A
49 54anti-parallel
Strand 10
A
483 485parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
454 456anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 409first strand
Strand 2
A
424 426anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 198first strand
Strand 2
B
212 215parallel
Strand 3
B
146 150parallel
Strand 4
B
105 113parallel
Strand 5
B
259 265parallel
Strand 6
B
5 11parallel
Strand 7
B
304 310parallel
Strand 8
B
466 471anti-parallel
Strand 9
B
49 54anti-parallel
Strand 10
B
483 485parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 314first strand
Strand 2
B
461 462anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
318 319first strand
Strand 2
B
454 455anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 409first strand
Strand 2
B
424 426anti-parallel
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