Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WBI entry

There is 1 chain in PDB entry 3WBI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1GLU 602
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3WBI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 16Right-handed 310
Helix 2
2
A
17 27Right-handed alpha
Helix 3
3
A
49 57Right-handed alpha
Helix 4
4
A
58 62Right-handed 310
Helix 5
5
A
108 121Right-handed alpha
Helix 6
6
A
131 135Right-handed 310
Helix 7
7
A
145 152Right-handed alpha
Helix 8
8
A
154 175Right-handed alpha
Helix 9
9
A
183 185Right-handed 310
Helix 10
10
A
204 217Right-handed alpha
Helix 11
11
A
220 225Right-handed alpha
Helix 12
12
A
329 337Right-handed alpha
Helix 13
13
A
338 346Right-handed alpha
Helix 14
14
A
361 375Right-handed alpha
Helix 15
15
A
388 396Right-handed alpha
Helix 16
16
A
397 399Right-handed 310
Helix 17
17
A
402 405Right-handed 310
Helix 18
18
A
416 426Right-handed alpha
Helix 19
19
A
435 455Right-handed alpha
Helix 20
20
A
568 575Right-handed alpha
Helix 21
21
A
577 582Right-handed alpha
Helix 22
22
A
585 600Right-handed alpha
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There are 7 sheets in PDB entry 3WBI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
44 48anti-parallel
Strand 3
A
71 75anti-parallel
Strand 4
A
7 11parallel
Strand 5
A
96 102parallel
Strand 6
A
125 130parallel
Strand 7
A
192 196parallel
Strand 8
A
179 181parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
33 34anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 274first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
320 323anti-parallel
Strand 4
A
231 240anti-parallel
Strand 5
A
244 253anti-parallel
Strand 6
A
303 308anti-parallel
Strand 7
A
277 281anti-parallel
Strand 8
A
293 295anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
298 300anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 384first strand
Strand 2
A
355 359parallel
Strand 3
A
407 411parallel
Strand 4
A
429 433parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
508 522anti-parallel
Strand 3
A
496 503anti-parallel
Strand 4
A
563 565anti-parallel
Strand 5
A
466 475anti-parallel
Strand 6
A
481 492anti-parallel
Strand 7
A
529 531anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
508 522anti-parallel
Strand 3
A
539 544anti-parallel
Strand 4
A
481 492anti-parallel
Strand 5
A
529 531anti-parallel
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