Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WBJ entry

There is 1 chain in PDB entry 3WBJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1ARG 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3WBJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 27Right-handed alpha
Helix 2
2
A
49 56Right-handed alpha
Helix 3
3
A
57 60Right-handed 310
Helix 4
4
A
108 121Right-handed alpha
Helix 5
5
A
131 135Right-handed 310
Helix 6
6
A
145 152Right-handed alpha
Helix 7
7
A
154 175Right-handed alpha
Helix 8
8
A
183 185Right-handed 310
Helix 9
9
A
204 220Right-handed alpha
Helix 10
10
A
220 225Right-handed alpha
Helix 11
11
A
329 346Right-handed alpha
Helix 12
12
A
361 375Right-handed alpha
Helix 13
13
A
388 393Right-handed alpha
Helix 14
14
A
394 399Right-handed 310
Helix 15
15
A
402 405Right-handed 310
Helix 16
16
A
416 426Right-handed alpha
Helix 17
17
A
435 451Right-handed alpha
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There are 6 sheets in PDB entry 3WBJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
44 48anti-parallel
Strand 3
A
71 75anti-parallel
Strand 4
A
7 12parallel
Strand 5
A
96 102parallel
Strand 6
A
125 130parallel
Strand 7
A
192 196parallel
Strand 8
A
179 181parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
33 34anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 240first strand
Strand 2
A
244 253anti-parallel
Strand 3
A
303 309anti-parallel
Strand 4
A
275 281anti-parallel
Strand 5
A
293 296anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
298 300anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
321 323anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 384first strand
Strand 2
A
355 359parallel
Strand 3
A
407 411parallel
Strand 4
A
429 433parallel
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