Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WBK entry

There are 3 chains in PDB entry 3WBK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLU 602
B
 ASP 2GLU 602
C
 GLY 117ILE 127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3WBK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 16Right-handed 310
Helix 2
2
A
17 27Right-handed alpha
Helix 3
3
A
49 57Right-handed alpha
Helix 4
4
A
58 62Right-handed 310
Helix 5
5
A
78 88Right-handed alpha
Helix 6
6
A
108 122Right-handed alpha
Helix 7
7
A
131 135Right-handed 310
Helix 8
8
A
145 152Right-handed alpha
Helix 9
9
A
154 175Right-handed alpha
Helix 10
10
A
183 185Right-handed 310
Helix 11
11
A
204 217Right-handed alpha
Helix 12
12
A
329 348Right-handed alpha
Helix 13
13
A
361 376Right-handed alpha
Helix 14
14
A
388 397Right-handed alpha
Helix 15
15
A
402 405Right-handed 310
Helix 16
16
A
416 426Right-handed alpha
Helix 17
17
A
435 462Right-handed alpha
Helix 18
18
A
568 577Right-handed alpha
Helix 19
19
A
585 600Right-handed alpha
Helix 20
20
B
13 16Right-handed 310
Helix 21
21
B
17 27Right-handed alpha
Helix 22
22
B
49 57Right-handed alpha
Helix 23
23
B
58 62Right-handed 310
Helix 24
24
B
81 87Right-handed alpha
Helix 25
25
B
108 122Right-handed alpha
Helix 26
26
B
131 135Right-handed 310
Helix 27
27
B
145 152Right-handed alpha
Helix 28
28
B
154 175Right-handed alpha
Helix 29
29
B
183 185Right-handed 310
Helix 30
30
B
204 217Right-handed alpha
Helix 31
31
B
220 225Right-handed alpha
Helix 32
32
B
329 337Right-handed alpha
Helix 33
33
B
338 346Right-handed alpha
Helix 34
34
B
361 376Right-handed alpha
Helix 35
35
B
388 402Right-handed alpha
Helix 36
36
B
416 426Right-handed alpha
Helix 37
37
B
435 461Right-handed alpha
Helix 38
38
B
568 575Right-handed alpha
Helix 39
39
B
577 582Right-handed alpha
Helix 40
40
B
585 600Right-handed alpha
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There are 12 sheets in PDB entry 3WBK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
7 11parallel
Strand 4
A
96 102parallel
Strand 5
A
125 130parallel
Strand 6
A
192 196parallel
Strand 7
A
179 181parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 274first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
320 323anti-parallel
Strand 4
A
231 240anti-parallel
Strand 5
A
244 253anti-parallel
Strand 6
A
303 308anti-parallel
Strand 7
A
277 280anti-parallel
Strand 8
A
294 295anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 257first strand
Strand 2
A
298 299anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 384first strand
Strand 2
A
355 359parallel
Strand 3
A
407 411parallel
Strand 4
A
429 433parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
512 522anti-parallel
Strand 3
A
496 499anti-parallel
Strand 4
A
563 565anti-parallel
Strand 5
A
466 475anti-parallel
Strand 6
A
481 492anti-parallel
Strand 7
A
529 531anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
512 522anti-parallel
Strand 3
A
539 544anti-parallel
Strand 4
A
481 492anti-parallel
Strand 5
A
529 531anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
45 48anti-parallel
Strand 3
B
71 75anti-parallel
Strand 4
B
7 11parallel
Strand 5
B
96 102parallel
Strand 6
B
125 130parallel
Strand 7
B
192 196parallel
Strand 8
B
179 181parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 274first strand
Strand 2
B
261 264anti-parallel
Strand 3
B
320 323anti-parallel
Strand 4
B
231 240anti-parallel
Strand 5
B
244 253anti-parallel
Strand 6
B
304 308anti-parallel
Strand 7
B
277 281anti-parallel
Strand 8
B
293 295anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 257first strand
Strand 2
B
298 300anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 383first strand
Strand 2
B
355 358parallel
Strand 3
B
407 410parallel
Strand 4
B
429 432parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
525 527first strand
Strand 2
B
508 522anti-parallel
Strand 3
B
496 503anti-parallel
Strand 4
B
563 565anti-parallel
Strand 5
B
466 475anti-parallel
Strand 6
B
480 492anti-parallel
Strand 7
B
529 531anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
525 527first strand
Strand 2
B
508 522anti-parallel
Strand 3
B
539 544anti-parallel
Strand 4
B
480 492anti-parallel
Strand 5
B
529 531anti-parallel
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