Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WBN entry

There are 2 chains in PDB entry 3WBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5THR 454
B
 ALA 0GLY 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3WBN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
15 47Right-handed alpha
Helix 3
3
A
49 87Right-handed alpha
Helix 4
4
A
89 116Right-handed alpha
Helix 5
5
A
118 125Right-handed alpha
Helix 6
6
A
130 145Right-handed alpha
Helix 7
7
A
146 163Right-handed alpha
Helix 8
8
A
165 189Right-handed alpha
Helix 9
9
A
194 219Right-handed alpha
Helix 10
10
A
235 289Right-handed alpha
Helix 11
11
A
290 310Right-handed alpha
Helix 12
12
A
312 341Right-handed alpha
Helix 13
13
A
341 349Right-handed alpha
Helix 14
14
A
354 357Right-handed 310
Helix 15
15
A
358 367Right-handed alpha
Helix 16
16
A
368 374Right-handed 310
Helix 17
17
A
375 389Right-handed alpha
Helix 18
18
A
391 404Right-handed alpha
Helix 19
19
A
406 418Right-handed alpha
Helix 20
20
A
421 454Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3WBN.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
11 15anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il