Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WBR entry

There are 8 chains in PDB entry 3WBR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 82LYS 210
B
 SER 82LYS 210
C
 SER 82LYS 210
D
 CYS 83LYS 210
E
 CYS 83MET 208
F
 CYS 83LYS 210
G
 CYS 83LYS 209
H
 CYS 83LYS 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3WBR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
103 114Right-handed alpha
Helix 2
2
A
123 132Right-handed alpha
Helix 3
3
B
103 113Right-handed alpha
Helix 4
4
B
123 133Right-handed alpha
Helix 5
5
C
103 114Right-handed alpha
Helix 6
6
C
123 133Right-handed alpha
Helix 7
7
D
103 114Right-handed alpha
Helix 8
8
D
123 133Right-handed alpha
Helix 9
9
E
103 114Right-handed alpha
Helix 10
10
E
123 133Right-handed alpha
Helix 11
11
F
103 114Right-handed alpha
Helix 12
12
F
123 133Right-handed alpha
Helix 13
13
G
103 114Right-handed alpha
Helix 14
14
G
123 132Right-handed alpha
Helix 15
15
H
103 114Right-handed alpha
Helix 16
16
H
123 133Right-handed alpha
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There are 16 sheets in PDB entry 3WBR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
93 97anti-parallel
Strand 3
A
203 209anti-parallel
Strand 4
A
140 146parallel
Strand 5
A
179 186anti-parallel
Strand 6
A
190 196anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
203 209anti-parallel
Strand 3
A
140 146parallel
Strand 4
B
154 155anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
B
140 146anti-parallel
Strand 3
B
203 209parallel
Strand 4
B
117 118anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 90first strand
Strand 2
B
93 97anti-parallel
Strand 3
B
203 209anti-parallel
Strand 4
B
140 146parallel
Strand 5
B
179 186anti-parallel
Strand 6
B
190 197anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
88 90first strand
Strand 2
C
93 102anti-parallel
Strand 3
C
202 209anti-parallel
Strand 4
C
140 146parallel
Strand 5
C
179 185anti-parallel
Strand 6
C
191 196anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
117 118first strand
Strand 2
C
202 209anti-parallel
Strand 3
C
140 146parallel
Strand 4
G
154 155anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 155first strand
Strand 2
G
140 146anti-parallel
Strand 3
G
202 208parallel
Strand 4
G
117 118anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
88 90first strand
Strand 2
G
93 102anti-parallel
Strand 3
G
202 208anti-parallel
Strand 4
G
140 146parallel
Strand 5
G
179 186anti-parallel
Strand 6
G
190 197anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
88 90first strand
Strand 2
D
93 102anti-parallel
Strand 3
D
202 209anti-parallel
Strand 4
D
139 146parallel
Strand 5
D
179 185anti-parallel
Strand 6
D
191 196anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
117 118first strand
Strand 2
D
202 209anti-parallel
Strand 3
D
139 146parallel
Strand 4
E
154 155anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 155first strand
Strand 2
E
140 146anti-parallel
Strand 3
E
202 208parallel
Strand 4
E
117 118anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
88 90first strand
Strand 2
E
93 102anti-parallel
Strand 3
E
202 208anti-parallel
Strand 4
E
140 146parallel
Strand 5
E
179 185anti-parallel
Strand 6
E
191 196anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
88 90first strand
Strand 2
F
93 102anti-parallel
Strand 3
F
202 209anti-parallel
Strand 4
F
139 146parallel
Strand 5
F
179 185anti-parallel
Strand 6
F
191 196anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
117 118first strand
Strand 2
F
202 209anti-parallel
Strand 3
F
139 146parallel
Strand 4
H
154 155anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
154 155first strand
Strand 2
H
139 146anti-parallel
Strand 3
H
202 208parallel
Strand 4
H
117 118anti-parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
88 90first strand
Strand 2
H
93 102anti-parallel
Strand 3
H
202 208anti-parallel
Strand 4
H
139 146parallel
Strand 5
H
179 185anti-parallel
Strand 6
H
191 196anti-parallel
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