Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WBZ entry

There are 5 chains in PDB entry 3WBZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 3	ASP 268
B	SER 4	ASP 268
C	SER 4	ASP 268
D	ASN 3	ASP 268
E	MET 1	GLN 150

There are101 helices in PDB entry 3WBZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	13	Right-handed 310
Helix 2	2	A	32	40	Right-handed alpha
Helix 3	3	A	47	65	Right-handed alpha
Helix 4	4	A	87	91	Right-handed 310
Helix 5	5	A	92	116	Right-handed alpha
Helix 6	6	A	138	169	Right-handed alpha
Helix 7	7	A	173	182	Right-handed alpha
Helix 8	8	A	185	198	Right-handed alpha
Helix 9	9	A	200	204	Right-handed 310
Helix 10	10	A	205	211	Right-handed alpha
Helix 11	11	A	256	262	Right-handed alpha
Helix 12	12	A	263	267	Right-handed 310
Helix 13	13	B	6	13	Right-handed 310
Helix 14	14	B	32	40	Right-handed alpha
Helix 15	15	B	47	65	Right-handed alpha
Helix 16	16	B	87	91	Right-handed 310
Helix 17	17	B	92	116	Right-handed alpha
Helix 18	18	B	138	169	Right-handed alpha
Helix 19	19	B	173	182	Right-handed alpha
Helix 20	20	B	185	196	Right-handed alpha
Helix 21	21	B	200	204	Right-handed 310
Helix 22	22	B	205	211	Right-handed alpha
Helix 23	23	B	256	262	Right-handed alpha
Helix 24	24	B	263	267	Right-handed 310
Helix 25	25	C	6	13	Right-handed 310
Helix 26	26	C	32	40	Right-handed alpha
Helix 27	27	C	47	65	Right-handed alpha
Helix 28	28	C	87	91	Right-handed 310
Helix 29	29	C	92	116	Right-handed alpha
Helix 30	30	C	138	169	Right-handed alpha
Helix 31	31	C	173	182	Right-handed alpha
Helix 32	32	C	185	198	Right-handed alpha
Helix 33	33	C	200	204	Right-handed 310
Helix 34	34	C	205	211	Right-handed alpha
Helix 35	35	C	231	243	Right-handed alpha
Helix 36	36	C	256	262	Right-handed alpha
Helix 37	37	C	263	267	Right-handed 310
Helix 38	38	D	6	13	Right-handed 310
Helix 39	39	D	32	40	Right-handed alpha
Helix 40	40	D	47	65	Right-handed alpha
Helix 41	41	D	87	91	Right-handed 310
Helix 42	42	D	92	116	Right-handed alpha
Helix 43	43	D	138	169	Right-handed alpha
Helix 44	44	D	173	182	Right-handed alpha
Helix 45	45	D	185	198	Right-handed alpha
Helix 46	46	D	200	204	Right-handed 310
Helix 47	47	D	205	211	Right-handed alpha
Helix 48	48	D	231	243	Right-handed alpha
Helix 49	49	D	256	262	Right-handed alpha
Helix 50	50	D	263	268	Right-handed 310
Helix 51	51	E	6	13	Right-handed 310
Helix 52	52	E	32	40	Right-handed alpha
Helix 53	53	E	47	65	Right-handed alpha
Helix 54	54	E	87	91	Right-handed 310
Helix 55	55	E	92	116	Right-handed alpha
Helix 56	56	E	138	169	Right-handed alpha
Helix 57	57	E	173	182	Right-handed alpha
Helix 58	58	E	185	198	Right-handed alpha
Helix 59	59	E	200	204	Right-handed 310
Helix 60	60	E	205	211	Right-handed alpha
Helix 61	61	E	231	243	Right-handed alpha
Helix 62	62	E	256	262	Right-handed alpha
Helix 63	63	E	263	267	Right-handed 310
Helix 64	64	F	6	13	Right-handed 310
Helix 65	65	F	32	40	Right-handed alpha
Helix 66	66	F	47	65	Right-handed alpha
Helix 67	67	F	87	91	Right-handed 310
Helix 68	68	F	92	116	Right-handed alpha
Helix 69	69	F	138	169	Right-handed alpha
Helix 70	70	F	173	182	Right-handed alpha
Helix 71	71	F	185	196	Right-handed alpha
Helix 72	72	F	200	204	Right-handed 310
Helix 73	73	F	205	211	Right-handed alpha
Helix 74	74	F	234	243	Right-handed alpha
Helix 75	75	F	256	262	Right-handed alpha
Helix 76	76	F	263	267	Right-handed 310
Helix 77	77	G	6	13	Right-handed 310
Helix 78	78	G	32	40	Right-handed alpha
Helix 79	79	G	47	65	Right-handed alpha
Helix 80	80	G	87	91	Right-handed 310
Helix 81	81	G	92	116	Right-handed alpha
Helix 82	82	G	138	169	Right-handed alpha
Helix 83	83	G	173	182	Right-handed alpha
Helix 84	84	G	185	196	Right-handed alpha
Helix 85	85	G	200	204	Right-handed 310
Helix 86	86	G	205	211	Right-handed alpha
Helix 87	87	G	256	262	Right-handed alpha
Helix 88	88	G	263	267	Right-handed 310
Helix 89	89	H	6	13	Right-handed 310
Helix 90	90	H	32	40	Right-handed alpha
Helix 91	91	H	47	65	Right-handed alpha
Helix 92	92	H	87	91	Right-handed 310
Helix 93	93	H	92	116	Right-handed alpha
Helix 94	94	H	138	169	Right-handed alpha
Helix 95	95	H	173	182	Right-handed alpha
Helix 96	96	H	185	196	Right-handed alpha
Helix 97	97	H	200	204	Right-handed 310
Helix 98	98	H	205	211	Right-handed alpha
Helix 99	99	H	231	243	Right-handed alpha
Helix 100	100	H	256	262	Right-handed alpha
Helix 101	101	H	263	267	Right-handed 310

There are 8 sheets in PDB entry 3WBZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	136	first strand
Strand 2	A	23	30	anti-parallel
Strand 3	A	77	82	anti-parallel
Strand 4	A	68	74	anti-parallel
Strand 5	A	212	217	anti-parallel
Strand 6	A	245	249	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	136	first strand
Strand 2	B	23	30	anti-parallel
Strand 3	B	77	82	anti-parallel
Strand 4	B	68	74	anti-parallel
Strand 5	B	212	217	anti-parallel
Strand 6	B	245	249	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	136	first strand
Strand 2	C	23	30	anti-parallel
Strand 3	C	77	82	anti-parallel
Strand 4	C	68	74	anti-parallel
Strand 5	C	212	217	anti-parallel
Strand 6	C	245	249	anti-parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	136	first strand
Strand 2	D	23	30	anti-parallel
Strand 3	D	77	82	anti-parallel
Strand 4	D	68	74	anti-parallel
Strand 5	D	212	217	anti-parallel
Strand 6	D	245	249	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	136	first strand
Strand 2	E	23	30	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	68	74	anti-parallel
Strand 5	E	212	217	anti-parallel
Strand 6	E	245	249	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	129	136	first strand
Strand 2	F	23	30	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	68	74	anti-parallel
Strand 5	F	212	217	anti-parallel
Strand 6	F	245	249	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	129	136	first strand
Strand 2	G	23	30	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	68	74	anti-parallel
Strand 5	G	212	217	anti-parallel
Strand 6	G	245	249	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	129	136	first strand
Strand 2	H	23	30	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	68	74	anti-parallel
Strand 5	H	212	217	anti-parallel
Strand 6	H	245	249	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WBZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WBZ