Analysis of interatomic Contacts of Structural Units in PDB entry:
3WC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WC1 entry

There are 6 chains in PDB entry 3WC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4ASP 268
B
 SER 4ASP 268
C
 SER 4ASP 268
D
 SER 4ASP 268
P
 G 1 C 73
Q
 G 1 G 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 3WC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed 310
Helix 2
2
A
32 40Right-handed alpha
Helix 3
3
A
47 65Right-handed alpha
Helix 4
4
A
87 91Right-handed 310
Helix 5
5
A
92 116Right-handed alpha
Helix 6
6
A
138 169Right-handed alpha
Helix 7
7
A
173 182Right-handed alpha
Helix 8
8
A
185 196Right-handed alpha
Helix 9
9
A
200 204Right-handed 310
Helix 10
10
A
205 211Right-handed alpha
Helix 11
11
A
256 262Right-handed alpha
Helix 12
12
A
263 267Right-handed 310
Helix 13
13
B
6 13Right-handed 310
Helix 14
14
B
32 40Right-handed alpha
Helix 15
15
B
47 65Right-handed alpha
Helix 16
16
B
87 91Right-handed 310
Helix 17
17
B
92 116Right-handed alpha
Helix 18
18
B
138 169Right-handed alpha
Helix 19
19
B
173 181Right-handed alpha
Helix 20
20
B
185 198Right-handed alpha
Helix 21
21
B
200 204Right-handed 310
Helix 22
22
B
205 211Right-handed alpha
Helix 23
23
B
257 262Right-handed alpha
Helix 24
24
B
263 267Right-handed 310
Helix 25
25
C
6 13Right-handed 310
Helix 26
26
C
32 40Right-handed alpha
Helix 27
27
C
47 65Right-handed alpha
Helix 28
28
C
87 91Right-handed 310
Helix 29
29
C
92 116Right-handed alpha
Helix 30
30
C
138 169Right-handed alpha
Helix 31
31
C
173 181Right-handed alpha
Helix 32
32
C
185 196Right-handed alpha
Helix 33
33
C
200 204Right-handed 310
Helix 34
34
C
205 211Right-handed alpha
Helix 35
35
C
256 262Right-handed alpha
Helix 36
36
C
263 267Right-handed 310
Helix 37
37
D
6 13Right-handed 310
Helix 38
38
D
32 40Right-handed alpha
Helix 39
39
D
47 65Right-handed alpha
Helix 40
40
D
87 91Right-handed 310
Helix 41
41
D
92 116Right-handed alpha
Helix 42
42
D
138 169Right-handed alpha
Helix 43
43
D
173 181Right-handed alpha
Helix 44
44
D
185 196Right-handed alpha
Helix 45
45
D
200 204Right-handed 310
Helix 46
46
D
205 211Right-handed alpha
Helix 47
47
D
256 262Right-handed alpha
Helix 48
48
D
263 267Right-handed 310
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There are 4 sheets in PDB entry 3WC1. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 136first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
68 74anti-parallel
Strand 5
A
212 215anti-parallel
Strand 6
A
247 249anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 136first strand
Strand 2
B
23 30anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
68 74anti-parallel
Strand 5
B
212 215anti-parallel
Strand 6
B
247 249anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 136first strand
Strand 2
C
23 30anti-parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
68 74anti-parallel
Strand 5
C
212 215anti-parallel
Strand 6
C
247 249anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
129 136first strand
Strand 2
D
23 30anti-parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
68 74anti-parallel
Strand 5
D
212 215anti-parallel
Strand 6
D
247 249anti-parallel
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