Analysis of interatomic Contacts of Structural Units in PDB entry:
3WEE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WEE entry

There are 2 chains in PDB entry 3WEE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6PHE 467
B
 ASN 4LYS 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 3WEE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 92Right-handed alpha
Helix 2
2
A
120 134Right-handed alpha
Helix 3
3
A
145 153Right-handed alpha
Helix 4
4
A
190 202Right-handed alpha
Helix 5
5
A
206 215Right-handed alpha
Helix 6
6
A
223 229Right-handed alpha
Helix 7
7
A
295 300Right-handed 310
Helix 8
9
A
322 332Right-handed alpha
Helix 9
10
A
337 342Right-handed 310
Helix 10
11
A
344 358Right-handed alpha
Helix 11
12
A
362 375Right-handed alpha
Helix 12
13
A
378 387Right-handed alpha
Helix 13
14
A
423 441Right-handed alpha
Helix 14
15
A
451 458Right-handed alpha
Helix 15
16
A
459 465Right-handed 310
Helix 16
17
B
50 61Right-handed alpha
Helix 17
18
B
79 94Right-handed alpha
Helix 18
19
B
116 129Right-handed alpha
Helix 19
20
B
141 149Right-handed alpha
Helix 20
21
B
175 179Right-handed 310
Helix 21
22
B
185 203Right-handed alpha
Helix 22
23
B
216 226Right-handed alpha
Helix 23
24
B
226 236Right-handed alpha
Helix 24
25
B
242 257Right-handed alpha
Helix 25
26
B
282 285Right-handed 310
Helix 26
27
B
303 315Right-handed alpha
Helix 27
28
B
316 319Right-handed 310
Helix 28
29
B
324 327Right-handed 310
Helix 29
30
B
328 344Right-handed alpha
Helix 30
31
B
345 348Right-handed 310
Helix 31
32
B
381 391Right-handed alpha
Helix 32
33
B
396 401Right-handed 310
Helix 33
34
B
403 416Right-handed alpha
Helix 34
35
B
428 434Right-handed alpha
Helix 35
36
B
434 445Right-handed alpha
Helix 36
37
B
456 468Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3WEE. Click on sheet of interest to get list of strands forming it: A, B, C, D, F, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
10 14anti-parallel
Strand 4
A
111 115parallel
Strand 5
A
139 144parallel
Strand 6
A
449 450anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
63 65anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 69first strand
Strand 2
A
72 73anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
169 175anti-parallel
Strand 3
A
185 187anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 254first strand
Strand 2
A
290 294anti-parallel
Strand 3
A
282 285anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
35 39anti-parallel
Strand 3
B
65 68anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 181first strand
Strand 2
B
164 169anti-parallel
Strand 3
B
154 159anti-parallel
Strand 4
B
392 395parallel
Strand 5
B
423 425parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 292first strand
Strand 2
B
297 302anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il