Analysis of interatomic Contacts of Structural Units in PDB entry:
3WEV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WEV entry

There are 4 chains in PDB entry 3WEV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	TRP 580
A	PRO 582	GLU 686
B	ALA 2	TRP 580
B	PRO 582	LYS 685

There are 46 helices in PDB entry 3WEV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	92	96	Right-handed 310
Helix 2	2	A	105	113	Right-handed 310
Helix 3	3	A	128	136	Right-handed alpha
Helix 4	4	A	260	273	Right-handed alpha
Helix 5	5	A	295	299	Right-handed alpha
Helix 6	6	A	299	309	Right-handed alpha
Helix 7	7	A	310	312	Right-handed 310
Helix 8	8	A	315	322	Right-handed 310
Helix 9	9	A	332	334	Right-handed 310
Helix 10	10	A	335	345	Right-handed alpha
Helix 11	11	A	359	363	Right-handed 310
Helix 12	12	A	406	419	Right-handed alpha
Helix 13	13	A	432	440	Right-handed alpha
Helix 14	14	A	454	461	Right-handed 310
Helix 15	15	A	474	482	Right-handed alpha
Helix 16	16	A	488	493	Right-handed alpha
Helix 17	17	A	509	516	Right-handed alpha
Helix 18	18	A	595	603	Right-handed alpha
Helix 19	19	A	618	626	Right-handed alpha
Helix 20	20	A	627	629	Right-handed 310
Helix 21	21	A	651	655	Right-handed 310
Helix 22	22	A	662	667	Right-handed alpha
Helix 23	23	A	668	673	Right-handed 310
Helix 24	24	B	92	96	Right-handed 310
Helix 25	25	B	105	113	Right-handed 310
Helix 26	26	B	128	134	Right-handed alpha
Helix 27	27	B	260	273	Right-handed alpha
Helix 28	28	B	295	299	Right-handed alpha
Helix 29	29	B	299	309	Right-handed alpha
Helix 30	30	B	310	312	Right-handed 310
Helix 31	31	B	315	322	Right-handed 310
Helix 32	32	B	332	334	Right-handed 310
Helix 33	33	B	335	345	Right-handed alpha
Helix 34	34	B	359	363	Right-handed 310
Helix 35	35	B	406	419	Right-handed alpha
Helix 36	36	B	432	440	Right-handed alpha
Helix 37	37	B	454	461	Right-handed 310
Helix 38	38	B	474	482	Right-handed alpha
Helix 39	39	B	488	493	Right-handed alpha
Helix 40	40	B	509	516	Right-handed alpha
Helix 41	41	B	595	603	Right-handed alpha
Helix 42	42	B	618	626	Right-handed alpha
Helix 43	43	B	627	629	Right-handed 310
Helix 44	44	B	651	655	Right-handed 310
Helix 45	45	B	662	667	Right-handed alpha
Helix 46	46	B	668	673	Right-handed 310

There are 30 sheets in PDB entry 3WEV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	6	first strand
Strand 2	A	58	66	anti-parallel
Strand 3	A	72	73	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	24	first strand
Strand 2	A	58	66	parallel
Strand 3	A	193	196	anti-parallel
Strand 4	A	181	187	anti-parallel
Strand 5	A	150	154	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	237	247	parallel
Strand 3	A	223	232	anti-parallel
Strand 4	A	80	91	anti-parallel
Strand 5	A	137	138	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	237	247	parallel
Strand 3	A	223	232	anti-parallel
Strand 4	A	80	91	anti-parallel
Strand 5	A	142	145	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	36	first strand
Strand 2	A	42	45	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	175	first strand
Strand 2	A	202	204	anti-parallel
Strand 3	A	217	219	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	281	first strand
Strand 2	A	286	287	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	294	first strand
Strand 2	A	421	422	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	384	first strand
Strand 2	A	400	402	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	463	465	first strand
Strand 2	A	468	469	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	518	522	first strand
Strand 2	A	575	579	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	530	543	first strand
Strand 2	A	557	571	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	590	first strand
Strand 2	A	609	611	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	631	634	first strand
Strand 2	A	645	648	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	661	first strand
Strand 2	A	675	680	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	6	first strand
Strand 2	B	58	66	anti-parallel
Strand 3	B	72	73	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	24	first strand
Strand 2	B	58	66	parallel
Strand 3	B	193	196	anti-parallel
Strand 4	B	181	187	anti-parallel
Strand 5	B	150	154	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	237	247	parallel
Strand 3	B	223	232	anti-parallel
Strand 4	B	80	91	anti-parallel
Strand 5	B	137	138	anti-parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	237	247	parallel
Strand 3	B	223	232	anti-parallel
Strand 4	B	80	91	anti-parallel
Strand 5	B	142	145	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	36	first strand
Strand 2	B	42	45	anti-parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	175	first strand
Strand 2	B	202	204	anti-parallel
Strand 3	B	217	219	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	281	first strand
Strand 2	B	286	287	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	294	first strand
Strand 2	B	421	422	parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	384	first strand
Strand 2	B	400	402	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	465	first strand
Strand 2	B	468	469	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	518	522	first strand
Strand 2	B	575	579	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	543	first strand
Strand 2	B	557	571	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	590	first strand
Strand 2	B	609	611	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	631	634	first strand
Strand 2	B	645	648	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	661	first strand
Strand 2	B	675	680	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WEV

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WEV