Analysis of interatomic Contacts of Structural Units in PDB entry:
3WFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WFL entry

There is 1 chain in PDB entry 3WFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 35ILE 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3WFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 64Right-handed 310
Helix 2
2
A
66 81Right-handed alpha
Helix 3
3
A
121 134Right-handed alpha
Helix 4
4
A
150 160Right-handed alpha
Helix 5
5
A
164 168Right-handed 310
Helix 6
6
A
169 187Right-handed alpha
Helix 7
7
A
209 227Right-handed alpha
Helix 8
8
A
248 252Right-handed 310
Helix 9
9
A
258 264Right-handed alpha
Helix 10
10
A
277 281Right-handed 310
Helix 11
11
A
283 285Right-handed 310
Helix 12
12
A
286 302Right-handed alpha
Helix 13
13
A
315 330Right-handed alpha
Helix 14
14
A
361 368Right-handed alpha
Helix 15
15
A
368 374Right-handed alpha
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There are 5 sheets in PDB entry 3WFL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
49 50anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 233first strand
Strand 2
A
193 197parallel
Strand 3
A
137 141parallel
Strand 4
A
84 88parallel
Strand 5
A
53 57parallel
Strand 6
A
333 338parallel
Strand 7
A
305 310parallel
Strand 8
A
271 275parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
105 108parallel
Strand 3
A
111 114anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
357 358parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 345first strand
Strand 2
A
348 349anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il