Analysis of interatomic Contacts of Structural Units in PDB entry:
3WFQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WFQ entry

There are 6 chains in PDB entry 3WFQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 1 A 73
B
 G 1 A 73
C
 G 1 A 73
D
 G 1 A 73
E
 UNK 5UNK 504
F
 UNK 5VAL 53
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 3WFQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
E
23 31Right-handed alpha
Helix 2
2
E
41 50Right-handed alpha
Helix 3
3
E
66 79Right-handed alpha
Helix 4
4
E
120 130Right-handed alpha
Helix 5
5
E
143 147Right-handed alpha
Helix 6
6
E
161 169Right-handed alpha
Helix 7
7
E
175 182Right-handed alpha
Helix 8
8
E
184 196Right-handed alpha
Helix 9
9
E
201 211Right-handed alpha
Helix 10
10
E
212 218Right-handed 310
Helix 11
11
E
219 232Right-handed alpha
Helix 12
12
E
235 246Right-handed alpha
Helix 13
13
E
247 253Right-handed alpha
Helix 14
14
E
254 262Right-handed 310
Helix 15
15
E
273 290Right-handed alpha
Helix 16
16
E
291 294Right-handed 310
Helix 17
17
E
296 301Right-handed alpha
Helix 18
18
E
314 324Right-handed alpha
Helix 19
19
E
344 360Right-handed alpha
Helix 20
20
E
363 376Right-handed alpha
Helix 21
21
E
378 389Right-handed alpha
Helix 22
22
E
393 404Right-handed alpha
Helix 23
23
E
407 422Right-handed alpha
Helix 24
24
E
425 445Right-handed alpha
Helix 25
25
E
473 488Right-handed alpha
Helix 26
26
E
492 504Right-handed alpha
Helix 27
27
F
23 31Right-handed alpha
Helix 28
28
F
41 49Right-handed alpha
Helix 29
29
F
66 78Right-handed alpha
Helix 30
30
F
120 131Right-handed alpha
Helix 31
31
F
134 138Right-handed 310
Helix 32
32
F
143 147Right-handed alpha
Helix 33
33
F
161 169Right-handed alpha
Helix 34
34
F
175 182Right-handed alpha
Helix 35
35
F
184 196Right-handed alpha
Helix 36
36
F
201 211Right-handed alpha
Helix 37
37
F
212 218Right-handed 310
Helix 38
38
F
219 233Right-handed alpha
Helix 39
39
F
235 246Right-handed alpha
Helix 40
40
F
247 253Right-handed alpha
Helix 41
41
F
253 258Right-handed alpha
Helix 42
42
F
259 262Right-handed 310
Helix 43
43
F
273 290Right-handed alpha
Helix 44
44
F
291 294Right-handed 310
Helix 45
45
F
296 301Right-handed alpha
Helix 46
46
F
313 324Right-handed alpha
Helix 47
47
F
344 360Right-handed alpha
Helix 48
48
F
363 376Right-handed alpha
Helix 49
49
F
378 388Right-handed alpha
Helix 50
50
F
393 404Right-handed alpha
Helix 51
51
F
407 422Right-handed alpha
Helix 52
52
F
425 447Right-handed alpha
Helix 53
53
F
475 487Right-handed alpha
Helix 54
54
F
492 503Right-handed alpha
Helix 55
55
G
23 31Right-handed alpha
Helix 56
56
G
41 50Right-handed alpha
Helix 57
57
G
66 79Right-handed alpha
Helix 58
58
G
120 130Right-handed alpha
Helix 59
59
G
134 138Right-handed 310
Helix 60
60
G
143 147Right-handed alpha
Helix 61
61
G
161 168Right-handed alpha
Helix 62
62
G
175 182Right-handed alpha
Helix 63
63
G
184 196Right-handed alpha
Helix 64
64
G
201 211Right-handed alpha
Helix 65
65
G
212 218Right-handed 310
Helix 66
66
G
219 233Right-handed alpha
Helix 67
67
G
235 246Right-handed alpha
Helix 68
68
G
247 253Right-handed alpha
Helix 69
69
G
253 258Right-handed alpha
Helix 70
70
G
273 290Right-handed alpha
Helix 71
71
G
296 302Right-handed alpha
Helix 72
72
G
313 324Right-handed alpha
Helix 73
73
G
344 360Right-handed alpha
Helix 74
74
G
363 376Right-handed alpha
Helix 75
75
G
378 389Right-handed alpha
Helix 76
76
G
393 404Right-handed alpha
Helix 77
77
G
407 422Right-handed alpha
Helix 78
78
G
425 445Right-handed alpha
Helix 79
79
G
474 488Right-handed alpha
Helix 80
80
G
492 504Right-handed alpha
Helix 81
81
H
23 29Right-handed alpha
Helix 82
82
H
41 50Right-handed alpha
Helix 83
83
H
66 79Right-handed alpha
Helix 84
84
H
120 131Right-handed alpha
Helix 85
85
H
134 138Right-handed 310
Helix 86
86
H
143 147Right-handed alpha
Helix 87
87
H
161 169Right-handed alpha
Helix 88
88
H
175 182Right-handed alpha
Helix 89
89
H
184 196Right-handed alpha
Helix 90
90
H
201 211Right-handed alpha
Helix 91
91
H
212 217Right-handed 310
Helix 92
92
H
219 233Right-handed alpha
Helix 93
93
H
235 246Right-handed alpha
Helix 94
94
H
247 253Right-handed alpha
Helix 95
95
H
253 258Right-handed alpha
Helix 96
96
H
273 290Right-handed alpha
Helix 97
97
H
291 294Right-handed 310
Helix 98
98
H
296 301Right-handed alpha
Helix 99
99
H
313 324Right-handed alpha
Helix 100
100
H
344 360Right-handed alpha
Helix 101
101
H
363 376Right-handed alpha
Helix 102
102
H
378 389Right-handed alpha
Helix 103
103
H
393 404Right-handed alpha
Helix 104
104
H
407 422Right-handed alpha
Helix 105
105
H
425 445Right-handed alpha
Helix 106
106
H
472 487Right-handed alpha
Helix 107
107
H
492 504Right-handed alpha
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There are 9 sheets in PDB entry 3WFQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 85first strand
Strand 2
E
97 103anti-parallel
Strand 3
E
108 115anti-parallel
Strand 4
E
56 63parallel
Strand 5
E
37 40anti-parallel
Strand 6
E
141 142anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
170 171first strand
Strand 2
E
199 200parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
307 308first strand
Strand 2
E
312 313anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
81 85first strand
Strand 2
F
97 103anti-parallel
Strand 3
F
108 115anti-parallel
Strand 4
F
56 63parallel
Strand 5
F
37 40anti-parallel
Strand 6
F
140 142anti-parallel
Strand 7
F
156 157anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
170 171first strand
Strand 2
F
199 200parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
81 85first strand
Strand 2
G
97 103anti-parallel
Strand 3
G
108 115anti-parallel
Strand 4
G
56 63parallel
Strand 5
G
37 40anti-parallel
Strand 6
G
140 142anti-parallel
Strand 7
G
156 157anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
170 171first strand
Strand 2
G
199 200parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
81 85first strand
Strand 2
H
97 103anti-parallel
Strand 3
H
108 115anti-parallel
Strand 4
H
56 63parallel
Strand 5
H
37 40anti-parallel
Strand 6
H
140 142anti-parallel
Strand 7
H
156 157anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
170 171first strand
Strand 2
H
199 200parallel
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