Analysis of interatomic Contacts of Structural Units in PDB entry:
3WFR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WFR entry

There are 6 chains in PDB entry 3WFR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 1 A 73
B
 G 1 A 73
C
 G 1 C 74
D
 G 1 C 74
E
 UNK 5UNK 505
F
 UNK 5LYS 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are110 helices in PDB entry 3WFR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
E
23 31Right-handed alpha
Helix 2
2
E
41 50Right-handed alpha
Helix 3
3
E
66 79Right-handed alpha
Helix 4
4
E
120 130Right-handed alpha
Helix 5
5
E
135 138Right-handed 310
Helix 6
6
E
143 147Right-handed alpha
Helix 7
7
E
161 168Right-handed alpha
Helix 8
8
E
175 182Right-handed alpha
Helix 9
9
E
184 196Right-handed alpha
Helix 10
10
E
201 211Right-handed alpha
Helix 11
11
E
212 218Right-handed 310
Helix 12
12
E
219 233Right-handed alpha
Helix 13
13
E
235 246Right-handed alpha
Helix 14
14
E
247 253Right-handed alpha
Helix 15
15
E
253 258Right-handed alpha
Helix 16
16
E
259 261Right-handed 310
Helix 17
17
E
273 290Right-handed alpha
Helix 18
18
E
290 295Right-handed alpha
Helix 19
19
E
296 302Right-handed alpha
Helix 20
20
E
313 324Right-handed alpha
Helix 21
21
E
344 360Right-handed alpha
Helix 22
22
E
363 376Right-handed alpha
Helix 23
23
E
378 389Right-handed alpha
Helix 24
24
E
393 404Right-handed alpha
Helix 25
25
E
407 423Right-handed alpha
Helix 26
26
E
425 445Right-handed alpha
Helix 27
27
E
474 488Right-handed alpha
Helix 28
28
E
493 505Right-handed alpha
Helix 29
29
F
23 31Right-handed alpha
Helix 30
30
F
41 50Right-handed alpha
Helix 31
31
F
66 79Right-handed alpha
Helix 32
32
F
120 131Right-handed alpha
Helix 33
33
F
143 147Right-handed alpha
Helix 34
34
F
161 167Right-handed alpha
Helix 35
35
F
175 182Right-handed alpha
Helix 36
36
F
184 196Right-handed alpha
Helix 37
37
F
201 211Right-handed alpha
Helix 38
38
F
212 218Right-handed 310
Helix 39
39
F
219 233Right-handed alpha
Helix 40
40
F
235 246Right-handed alpha
Helix 41
41
F
247 253Right-handed alpha
Helix 42
42
F
254 260Right-handed 310
Helix 43
43
F
273 290Right-handed alpha
Helix 44
44
F
290 295Right-handed alpha
Helix 45
45
F
313 324Right-handed alpha
Helix 46
46
F
344 360Right-handed alpha
Helix 47
47
F
363 376Right-handed alpha
Helix 48
48
F
378 389Right-handed alpha
Helix 49
49
F
393 404Right-handed alpha
Helix 50
50
F
407 422Right-handed alpha
Helix 51
51
F
425 445Right-handed alpha
Helix 52
52
F
475 488Right-handed alpha
Helix 53
53
F
493 505Right-handed alpha
Helix 54
54
G
21 29Right-handed alpha
Helix 55
55
G
41 50Right-handed alpha
Helix 56
56
G
66 79Right-handed alpha
Helix 57
57
G
120 130Right-handed alpha
Helix 58
58
G
143 148Right-handed alpha
Helix 59
59
G
161 168Right-handed alpha
Helix 60
60
G
175 182Right-handed alpha
Helix 61
61
G
184 196Right-handed alpha
Helix 62
62
G
201 211Right-handed alpha
Helix 63
63
G
212 218Right-handed 310
Helix 64
64
G
219 233Right-handed alpha
Helix 65
65
G
235 246Right-handed alpha
Helix 66
66
G
247 253Right-handed alpha
Helix 67
67
G
254 262Right-handed 310
Helix 68
68
G
273 290Right-handed alpha
Helix 69
69
G
291 294Right-handed 310
Helix 70
70
G
296 302Right-handed alpha
Helix 71
71
G
313 324Right-handed alpha
Helix 72
72
G
344 360Right-handed alpha
Helix 73
73
G
363 376Right-handed alpha
Helix 74
74
G
378 389Right-handed alpha
Helix 75
75
G
393 404Right-handed alpha
Helix 76
76
G
407 422Right-handed alpha
Helix 77
77
G
425 445Right-handed alpha
Helix 78
78
G
462 469Right-handed alpha
Helix 79
79
G
474 488Right-handed alpha
Helix 80
80
G
492 505Right-handed alpha
Helix 81
81
H
22 31Right-handed alpha
Helix 82
82
H
41 50Right-handed alpha
Helix 83
83
H
66 79Right-handed alpha
Helix 84
84
H
120 130Right-handed alpha
Helix 85
85
H
134 138Right-handed 310
Helix 86
86
H
143 147Right-handed alpha
Helix 87
87
H
161 168Right-handed alpha
Helix 88
88
H
175 182Right-handed alpha
Helix 89
89
H
184 196Right-handed alpha
Helix 90
90
H
201 211Right-handed alpha
Helix 91
91
H
212 218Right-handed 310
Helix 92
92
H
219 233Right-handed alpha
Helix 93
93
H
235 246Right-handed alpha
Helix 94
94
H
247 253Right-handed alpha
Helix 95
95
H
253 258Right-handed alpha
Helix 96
96
H
259 261Right-handed 310
Helix 97
97
H
273 290Right-handed alpha
Helix 98
98
H
290 295Right-handed alpha
Helix 99
99
H
296 302Right-handed alpha
Helix 100
100
H
313 324Right-handed alpha
Helix 101
101
H
344 361Right-handed alpha
Helix 102
102
H
363 376Right-handed alpha
Helix 103
103
H
378 389Right-handed alpha
Helix 104
104
H
393 404Right-handed alpha
Helix 105
105
H
407 422Right-handed alpha
Helix 106
106
H
425 445Right-handed alpha
Helix 107
107
H
447 453Right-handed alpha
Helix 108
108
H
462 469Right-handed alpha
Helix 109
109
H
474 486Right-handed alpha
Helix 110
110
H
492 505Right-handed alpha
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There are 9 sheets in PDB entry 3WFR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 85first strand
Strand 2
E
97 103anti-parallel
Strand 3
E
108 115anti-parallel
Strand 4
E
56 63parallel
Strand 5
E
37 40anti-parallel
Strand 6
E
140 142anti-parallel
Strand 7
E
156 157anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
170 171first strand
Strand 2
E
199 200parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
81 85first strand
Strand 2
F
97 103anti-parallel
Strand 3
F
108 115anti-parallel
Strand 4
F
56 63parallel
Strand 5
F
37 40anti-parallel
Strand 6
F
140 142anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
170 171first strand
Strand 2
F
199 200parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
81 84first strand
Strand 2
G
98 103anti-parallel
Strand 3
G
108 115anti-parallel
Strand 4
G
56 63parallel
Strand 5
G
37 40anti-parallel
Strand 6
G
140 142anti-parallel
Strand 7
G
156 157anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
170 171first strand
Strand 2
G
199 200parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
81 82first strand
Strand 2
H
96 103anti-parallel
Strand 3
H
85 86anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
81 82first strand
Strand 2
H
96 103anti-parallel
Strand 3
H
108 115anti-parallel
Strand 4
H
56 63parallel
Strand 5
H
37 40anti-parallel
Strand 6
H
140 142anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
170 171first strand
Strand 2
H
199 200parallel
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