Analysis of interatomic Contacts of Structural Units in PDB entry:
3WFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WFS entry

There are 4 chains in PDB entry 3WFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 1 C 74
B
 G 1 C 74
C
 UNK 5UNK 504
D
 UNK 5LYS 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3WFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
36 29Right-handed alpha
Helix 2
2
C
54 62Right-handed alpha
Helix 3
3
C
66 79Right-handed alpha
Helix 4
4
C
120 130Right-handed alpha
Helix 5
5
C
170 147Right-handed alpha
Helix 6
6
C
161 168Right-handed alpha
Helix 7
7
C
175 182Right-handed alpha
Helix 8
8
C
184 196Right-handed alpha
Helix 9
9
C
201 211Right-handed alpha
Helix 10
10
C
212 218Right-handed 310
Helix 11
11
C
219 233Right-handed alpha
Helix 12
12
C
235 246Right-handed alpha
Helix 13
13
C
247 253Right-handed alpha
Helix 14
14
C
254 260Right-handed 310
Helix 15
15
C
273 290Right-handed alpha
Helix 16
16
C
290 295Right-handed alpha
Helix 17
17
C
296 302Right-handed alpha
Helix 18
18
C
314 324Right-handed alpha
Helix 19
19
C
344 360Right-handed alpha
Helix 20
20
C
405 376Right-handed alpha
Helix 21
21
C
378 389Right-handed alpha
Helix 22
22
C
393 404Right-handed alpha
Helix 23
23
C
407 422Right-handed alpha
Helix 24
24
C
425 445Right-handed alpha
Helix 25
25
C
473 488Right-handed alpha
Helix 26
26
C
492 504Right-handed alpha
Helix 27
27
D
36 29Right-handed alpha
Helix 28
28
D
54 50Right-handed alpha
Helix 29
29
D
66 79Right-handed alpha
Helix 30
30
D
133 130Right-handed alpha
Helix 31
31
D
143 166Right-handed alpha
Helix 32
32
D
161 168Right-handed alpha
Helix 33
33
D
175 182Right-handed alpha
Helix 34
34
D
184 196Right-handed alpha
Helix 35
35
D
201 211Right-handed alpha
Helix 36
36
D
212 218Right-handed 310
Helix 37
37
D
219 233Right-handed alpha
Helix 38
38
D
235 246Right-handed alpha
Helix 39
39
D
247 253Right-handed alpha
Helix 40
40
D
254 260Right-handed 310
Helix 41
41
D
299 290Right-handed alpha
Helix 42
42
D
290 295Right-handed alpha
Helix 43
43
D
296 302Right-handed alpha
Helix 44
44
D
313 324Right-handed alpha
Helix 45
45
D
344 360Right-handed alpha
Helix 46
46
D
396 376Right-handed alpha
Helix 47
47
D
411 389Right-handed alpha
Helix 48
48
D
393 404Right-handed alpha
Helix 49
49
D
407 422Right-handed alpha
Helix 50
50
D
425 445Right-handed alpha
Helix 51
51
D
473 487Right-handed alpha
Helix 52
52
D
492 504Right-handed alpha
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There are 5 sheets in PDB entry 3WFS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 85first strand
Strand 2
C
97 103anti-parallel
Strand 3
C
108 115anti-parallel
Strand 4
C
56 63parallel
Strand 5
C
37 53anti-parallel
Strand 6
C
140 142anti-parallel
Strand 7
C
156 157anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
170 198first strand
Strand 2
C
199 227parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
307 308first strand
Strand 2
C
312 313anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
81 86first strand
Strand 2
D
96 103anti-parallel
Strand 3
D
108 115anti-parallel
Strand 4
D
56 63parallel
Strand 5
D
37 53anti-parallel
Strand 6
D
140 142anti-parallel
Strand 7
D
156 157anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
170 171first strand
Strand 2
D
199 200parallel
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