Analysis of interatomic Contacts of Structural Units in PDB entry:
3WGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WGC entry

There are 4 chains in PDB entry 3WGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2LEU 336
B
 ARG 2LEU 336
C
 ARG 2LEU 336
D
 ARG 2LEU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 3WGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed 310
Helix 2
2
A
15 24Right-handed alpha
Helix 3
3
A
29 33Right-handed 310
Helix 4
4
A
35 49Right-handed alpha
Helix 5
5
A
59 72Right-handed alpha
Helix 6
6
A
84 89Right-handed alpha
Helix 7
7
A
92 97Right-handed alpha
Helix 8
8
A
114 122Right-handed alpha
Helix 9
9
A
147 161Right-handed alpha
Helix 10
10
A
171 180Right-handed alpha
Helix 11
11
A
182 188Right-handed alpha
Helix 12
12
A
212 227Right-handed alpha
Helix 13
13
A
233 247Right-handed alpha
Helix 14
14
A
250 265Right-handed alpha
Helix 15
15
A
294 302Right-handed alpha
Helix 16
16
A
321 336Right-handed alpha
Helix 17
17
B
8 12Right-handed 310
Helix 18
18
B
15 24Right-handed alpha
Helix 19
19
B
29 33Right-handed 310
Helix 20
20
B
35 49Right-handed alpha
Helix 21
21
B
59 72Right-handed alpha
Helix 22
22
B
84 89Right-handed alpha
Helix 23
23
B
92 97Right-handed alpha
Helix 24
24
B
114 122Right-handed alpha
Helix 25
25
B
147 161Right-handed alpha
Helix 26
26
B
171 180Right-handed alpha
Helix 27
27
B
182 188Right-handed alpha
Helix 28
28
B
212 227Right-handed alpha
Helix 29
29
B
233 247Right-handed alpha
Helix 30
30
B
250 266Right-handed alpha
Helix 31
31
B
275 278Right-handed 310
Helix 32
32
B
291 301Right-handed alpha
Helix 33
33
B
321 336Right-handed alpha
Helix 34
34
C
8 12Right-handed 310
Helix 35
35
C
15 24Right-handed alpha
Helix 36
36
C
29 33Right-handed 310
Helix 37
37
C
35 49Right-handed alpha
Helix 38
38
C
59 72Right-handed alpha
Helix 39
39
C
84 89Right-handed alpha
Helix 40
40
C
92 97Right-handed alpha
Helix 41
41
C
114 122Right-handed alpha
Helix 42
42
C
147 161Right-handed alpha
Helix 43
43
C
171 180Right-handed alpha
Helix 44
44
C
182 188Right-handed alpha
Helix 45
45
C
212 227Right-handed alpha
Helix 46
46
C
233 247Right-handed alpha
Helix 47
47
C
250 265Right-handed alpha
Helix 48
48
C
274 278Right-handed 310
Helix 49
49
C
293 302Right-handed alpha
Helix 50
50
C
321 336Right-handed alpha
Helix 51
51
D
8 12Right-handed 310
Helix 52
52
D
15 24Right-handed alpha
Helix 53
53
D
29 33Right-handed 310
Helix 54
54
D
35 49Right-handed alpha
Helix 55
55
D
59 72Right-handed alpha
Helix 56
56
D
84 89Right-handed alpha
Helix 57
57
D
92 97Right-handed alpha
Helix 58
58
D
114 122Right-handed alpha
Helix 59
59
D
147 161Right-handed alpha
Helix 60
60
D
171 180Right-handed alpha
Helix 61
61
D
182 188Right-handed alpha
Helix 62
62
D
212 227Right-handed alpha
Helix 63
63
D
233 247Right-handed alpha
Helix 64
64
D
250 266Right-handed alpha
Helix 65
65
D
275 278Right-handed 310
Helix 66
66
D
292 301Right-handed alpha
Helix 67
67
D
321 336Right-handed alpha
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There are 12 sheets in PDB entry 3WGC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
304 305parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
207 211anti-parallel
Strand 3
A
192 196anti-parallel
Strand 4
A
164 169parallel
Strand 5
A
132 138parallel
Strand 6
A
77 81parallel
Strand 7
A
101 105parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 285first strand
Strand 2
A
312 315anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
304 305parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
207 211anti-parallel
Strand 3
B
192 196anti-parallel
Strand 4
B
164 169parallel
Strand 5
B
132 138parallel
Strand 6
B
77 81parallel
Strand 7
B
101 105parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 273first strand
Strand 2
B
282 287anti-parallel
Strand 3
B
312 315anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 5first strand
Strand 2
C
304 305parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 57first strand
Strand 2
C
207 211anti-parallel
Strand 3
C
192 196anti-parallel
Strand 4
C
164 169parallel
Strand 5
C
132 138parallel
Strand 6
C
77 81parallel
Strand 7
C
101 105parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
282 285first strand
Strand 2
C
312 315anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 5first strand
Strand 2
D
304 305parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 57first strand
Strand 2
D
207 211anti-parallel
Strand 3
D
192 196anti-parallel
Strand 4
D
164 169parallel
Strand 5
D
132 138parallel
Strand 6
D
77 81parallel
Strand 7
D
101 105parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
271 273first strand
Strand 2
D
282 287anti-parallel
Strand 3
D
312 315anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il