Analysis of interatomic Contacts of Structural Units in PDB entry:
3WGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WGG entry

There are 2 chains in PDB entry 3WGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LYS 216
B
 LYS 4LYS 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3WGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 28Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
45 55Right-handed alpha
Helix 4
4
A
68 79Right-handed alpha
Helix 5
5
A
93 101Right-handed alpha
Helix 6
6
A
103 108Right-handed alpha
Helix 7
7
A
119 123Right-handed 310
Helix 8
8
A
137 145Right-handed alpha
Helix 9
9
A
155 157Right-handed 310
Helix 10
10
A
158 169Right-handed alpha
Helix 11
11
A
195 216Right-handed alpha
Helix 12
12
B
8 28Right-handed alpha
Helix 13
13
B
34 43Right-handed alpha
Helix 14
14
B
45 55Right-handed alpha
Helix 15
15
B
68 79Right-handed alpha
Helix 16
16
B
93 101Right-handed alpha
Helix 17
17
B
103 108Right-handed alpha
Helix 18
18
B
119 123Right-handed 310
Helix 19
19
B
137 145Right-handed alpha
Helix 20
20
B
155 157Right-handed 310
Helix 21
21
B
158 169Right-handed alpha
Helix 22
22
B
195 215Right-handed alpha
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There are 4 sheets in PDB entry 3WGG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
66 67anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
130 134anti-parallel
Strand 3
A
110 117parallel
Strand 4
A
85 90parallel
Strand 5
A
149 152parallel
Strand 6
A
173 176parallel
Strand 7
A
189 192parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
66 67anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
130 134anti-parallel
Strand 3
B
110 117parallel
Strand 4
B
85 90parallel
Strand 5
B
149 152parallel
Strand 6
B
173 176parallel
Strand 7
B
189 192parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il