Analysis of interatomic Contacts of Structural Units in PDB entry:
3WGM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WGM entry

There are 2 chains in PDB entry 3WGM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 12GLY 312
B
 ALA 12GLY 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3WGM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
46 52Right-handed alpha
Helix 3
3
A
62 67Right-handed alpha
Helix 4
4
A
74 85Right-handed alpha
Helix 5
5
A
85 94Right-handed alpha
Helix 6
6
A
108 124Right-handed alpha
Helix 7
7
A
136 139Right-handed 310
Helix 8
8
A
140 158Right-handed alpha
Helix 9
9
A
168 173Right-handed alpha
Helix 10
10
A
178 202Right-handed alpha
Helix 11
11
A
208 217Right-handed alpha
Helix 12
12
A
233 243Right-handed alpha
Helix 13
13
A
269 284Right-handed alpha
Helix 14
14
A
298 301Right-handed 310
Helix 15
15
B
20 33Right-handed alpha
Helix 16
16
B
46 52Right-handed alpha
Helix 17
17
B
62 67Right-handed alpha
Helix 18
18
B
74 85Right-handed alpha
Helix 19
19
B
85 94Right-handed alpha
Helix 20
20
B
108 124Right-handed alpha
Helix 21
21
B
136 139Right-handed 310
Helix 22
22
B
140 158Right-handed alpha
Helix 23
23
B
166 173Right-handed alpha
Helix 24
24
B
178 201Right-handed alpha
Helix 25
25
B
208 217Right-handed alpha
Helix 26
26
B
233 243Right-handed alpha
Helix 27
27
B
269 284Right-handed alpha
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There are 2 sheets in PDB entry 3WGM. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
39 44parallel
Strand 3
A
14 19parallel
Strand 4
A
98 104parallel
Strand 5
A
127 134parallel
Strand 6
A
160 165parallel
Strand 7
A
220 229parallel
Strand 8
A
304 311anti-parallel
Strand 9
A
257 264anti-parallel
Strand 10
A
289 296parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
39 44parallel
Strand 3
B
14 19parallel
Strand 4
B
98 104parallel
Strand 5
B
127 134parallel
Strand 6
B
160 165parallel
Strand 7
B
220 229parallel
Strand 8
B
304 311anti-parallel
Strand 9
B
257 264anti-parallel
Strand 10
B
289 296parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il