Analysis of interatomic Contacts of Structural Units in PDB entry:
3WGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WGW entry

There are 2 chains in PDB entry 3WGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 255
B
 MET 1ILE 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 3WGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 21Right-handed alpha
Helix 2
2
A
55 57Right-handed 310
Helix 3
3
A
72 80Right-handed alpha
Helix 4
4
A
141 153Right-handed alpha
Helix 5
5
A
209 216Right-handed alpha
Helix 6
6
A
217 222Right-handed 310
Helix 7
7
B
9 21Right-handed alpha
Helix 8
8
B
55 57Right-handed 310
Helix 9
9
B
72 81Right-handed alpha
Helix 10
10
B
141 153Right-handed alpha
Helix 11
11
B
209 216Right-handed alpha
Helix 12
12
B
217 222Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 3WGW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
2 6anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
98 104anti-parallel
Strand 5
A
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 71first strand
Strand 2
A
25 31anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
47 53anti-parallel
Strand 5
A
245 251anti-parallel
Strand 6
A
235 241anti-parallel
Strand 7
A
224 229anti-parallel
Strand 8
A
135 140anti-parallel
Strand 9
A
196 199anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 183first strand
Strand 2
A
166 172anti-parallel
Strand 3
A
157 162anti-parallel
Strand 4
A
203 208anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 62first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
87 92anti-parallel
Strand 4
B
98 104anti-parallel
Strand 5
B
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 71first strand
Strand 2
B
25 31anti-parallel
Strand 3
B
34 40anti-parallel
Strand 4
B
46 53anti-parallel
Strand 5
B
245 251anti-parallel
Strand 6
B
233 241anti-parallel
Strand 7
B
224 230anti-parallel
Strand 8
B
135 140anti-parallel
Strand 9
B
196 199anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 183first strand
Strand 2
B
166 172anti-parallel
Strand 3
B
157 163anti-parallel
Strand 4
B
203 208anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il