Analysis of interatomic Contacts of Structural Units in PDB entry:
3WH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WH5 entry

There is 1 chain in PDB entry 3WH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4GLN 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3WH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 22Right-handed alpha
Helix 2
2
A
26 30Right-handed 310
Helix 3
3
A
33 40Right-handed alpha
Helix 4
4
A
56 71Right-handed alpha
Helix 5
5
A
81 86Right-handed alpha
Helix 6
6
A
94 111Right-handed alpha
Helix 7
7
A
125 130Right-handed alpha
Helix 8
8
A
131 135Right-handed 310
Helix 9
9
A
136 155Right-handed alpha
Helix 10
10
A
166 176Right-handed alpha
Helix 11
11
A
186 212Right-handed alpha
Helix 12
12
A
233 248Right-handed alpha
Helix 13
13
A
248 256Right-handed alpha
Helix 14
14
A
261 269Right-handed alpha
Helix 15
15
A
270 272Right-handed 310
Helix 16
16
A
276 284Right-handed alpha
Helix 17
17
A
329 343Right-handed alpha
Helix 18
18
A
369 389Right-handed alpha
Helix 19
19
A
406 413Right-handed 310
Helix 20
20
A
430 443Right-handed alpha
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There are 3 sheets in PDB entry 3WH5. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
75 79parallel
Strand 3
A
114 120parallel
Strand 4
A
160 165parallel
Strand 5
A
217 223parallel
Strand 6
A
289 293parallel
Strand 7
A
348 353parallel
Strand 8
A
393 399parallel
Strand 9
A
11 15parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
298 302parallel
Strand 3
A
311 313anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 420first strand
Strand 2
A
427 429anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il