Analysis of interatomic Contacts of Structural Units in PDB entry:
3WI6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WI6 entry

There are 6 chains in PDB entry 3WI6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 46	GLU 347
B	PHE 46	GLU 347
C	PHE 46	GLU 347
D	PHE 46	GLU 347
E	PHE 46	GLU 347
F	PHE 46	GLU 347

There are 71 helices in PDB entry 3WI6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	58	61	Right-handed 310
Helix 2	2	A	98	112	Right-handed alpha
Helix 3	3	A	145	152	Right-handed alpha
Helix 4	4	A	160	180	Right-handed alpha
Helix 5	5	A	188	190	Right-handed 310
Helix 6	6	A	242	258	Right-handed alpha
Helix 7	7	A	272	282	Right-handed alpha
Helix 8	8	A	295	306	Right-handed alpha
Helix 9	9	A	309	313	Right-handed 310
Helix 10	10	A	315	322	Right-handed alpha
Helix 11	11	A	322	327	Right-handed alpha
Helix 12	12	A	337	343	Right-handed alpha
Helix 13	13	B	58	61	Right-handed 310
Helix 14	14	B	98	112	Right-handed alpha
Helix 15	15	B	146	152	Right-handed alpha
Helix 16	16	B	160	180	Right-handed alpha
Helix 17	17	B	188	190	Right-handed 310
Helix 18	18	B	242	258	Right-handed alpha
Helix 19	19	B	272	282	Right-handed alpha
Helix 20	20	B	295	306	Right-handed alpha
Helix 21	21	B	309	313	Right-handed 310
Helix 22	22	B	315	322	Right-handed alpha
Helix 23	23	B	322	327	Right-handed alpha
Helix 24	24	B	337	343	Right-handed alpha
Helix 25	25	C	58	61	Right-handed 310
Helix 26	26	C	98	112	Right-handed alpha
Helix 27	27	C	145	152	Right-handed alpha
Helix 28	28	C	160	180	Right-handed alpha
Helix 29	29	C	188	190	Right-handed 310
Helix 30	30	C	242	259	Right-handed alpha
Helix 31	31	C	272	282	Right-handed alpha
Helix 32	32	C	295	306	Right-handed alpha
Helix 33	33	C	315	322	Right-handed alpha
Helix 34	34	C	322	327	Right-handed alpha
Helix 35	35	C	337	343	Right-handed alpha
Helix 36	36	D	58	61	Right-handed 310
Helix 37	37	D	98	112	Right-handed alpha
Helix 38	38	D	145	152	Right-handed alpha
Helix 39	39	D	160	180	Right-handed alpha
Helix 40	40	D	188	190	Right-handed 310
Helix 41	41	D	242	258	Right-handed alpha
Helix 42	42	D	272	282	Right-handed alpha
Helix 43	43	D	295	306	Right-handed alpha
Helix 44	44	D	315	322	Right-handed alpha
Helix 45	45	D	322	327	Right-handed alpha
Helix 46	46	D	337	343	Right-handed alpha
Helix 47	47	E	58	61	Right-handed 310
Helix 48	48	E	98	112	Right-handed alpha
Helix 49	49	E	145	152	Right-handed alpha
Helix 50	50	E	160	180	Right-handed alpha
Helix 51	51	E	188	190	Right-handed 310
Helix 52	52	E	231	236	Right-handed alpha
Helix 53	53	E	242	258	Right-handed alpha
Helix 54	54	E	272	282	Right-handed alpha
Helix 55	55	E	295	306	Right-handed alpha
Helix 56	56	E	309	313	Right-handed 310
Helix 57	57	E	315	322	Right-handed alpha
Helix 58	58	E	322	327	Right-handed alpha
Helix 59	59	E	337	343	Right-handed alpha
Helix 60	60	F	58	61	Right-handed 310
Helix 61	61	F	98	112	Right-handed alpha
Helix 62	62	F	145	152	Right-handed alpha
Helix 63	63	F	160	180	Right-handed alpha
Helix 64	64	F	188	190	Right-handed 310
Helix 65	65	F	231	236	Right-handed alpha
Helix 66	66	F	242	258	Right-handed alpha
Helix 67	67	F	272	282	Right-handed alpha
Helix 68	68	F	295	306	Right-handed alpha
Helix 69	69	F	315	322	Right-handed alpha
Helix 70	70	F	322	327	Right-handed alpha
Helix 71	71	F	337	343	Right-handed alpha

There are 26 sheets in PDB entry 3WI6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	120	128	parallel
Strand 3	A	131	139	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	77	83	anti-parallel
Strand 6	A	63	72	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	120	128	parallel
Strand 3	D	49	50	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	159	first strand
Strand 2	A	335	336	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	183	first strand
Strand 2	A	212	213	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	203	205	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	120	128	parallel
Strand 3	B	131	139	anti-parallel
Strand 4	B	89	96	anti-parallel
Strand 5	B	77	83	anti-parallel
Strand 6	B	63	72	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	145	first strand
Strand 2	B	192	194	anti-parallel
Strand 3	B	203	205	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	159	first strand
Strand 2	B	335	336	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	212	213	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	50	first strand
Strand 2	E	120	128	anti-parallel
Strand 3	E	54	55	parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	50	first strand
Strand 2	E	120	128	anti-parallel
Strand 3	E	131	139	anti-parallel
Strand 4	E	89	96	anti-parallel
Strand 5	E	77	83	anti-parallel
Strand 6	E	63	72	anti-parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	120	128	parallel
Strand 3	C	131	139	anti-parallel
Strand 4	C	89	96	anti-parallel
Strand 5	C	77	83	anti-parallel
Strand 6	C	63	72	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	159	first strand
Strand 2	C	335	336	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	183	first strand
Strand 2	C	212	213	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	203	205	anti-parallel

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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	55	first strand
Strand 2	D	120	128	parallel
Strand 3	D	131	139	anti-parallel
Strand 4	D	89	96	anti-parallel
Strand 5	D	78	83	anti-parallel
Strand 6	D	63	71	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	159	first strand
Strand 2	D	335	336	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	183	first strand
Strand 2	D	212	213	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	194	first strand
Strand 2	D	203	205	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	335	336	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	182	183	first strand
Strand 2	E	212	213	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	194	first strand
Strand 2	E	203	205	anti-parallel

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There are 6 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	54	55	first strand
Strand 2	F	120	128	parallel
Strand 3	F	131	139	anti-parallel
Strand 4	F	89	96	anti-parallel
Strand 5	F	77	83	anti-parallel
Strand 6	F	63	72	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	159	first strand
Strand 2	F	335	336	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	183	first strand
Strand 2	F	212	213	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	194	first strand
Strand 2	F	203	205	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WI6

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WI6