Analysis of interatomic Contacts of Structural Units in PDB entry:
3WIQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WIQ entry

There is 1 chain in PDB entry 3WIQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3WIQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 25Right-handed alpha
Helix 2
2
A
84 88Right-handed 310
Helix 3
3
A
165 169Right-handed 310
Helix 4
4
A
258 271Right-handed alpha
Helix 5
5
A
274 294Right-handed alpha
Helix 6
6
A
300 318Right-handed alpha
Helix 7
7
A
335 340Right-handed 310
Helix 8
8
A
342 348Right-handed alpha
Helix 9
9
A
349 357Right-handed alpha
Helix 10
10
A
357 371Right-handed alpha
Helix 11
11
A
371 382Right-handed alpha
Helix 12
12
A
416 421Right-handed alpha
Helix 13
13
A
423 440Right-handed alpha
Helix 14
14
A
441 448Right-handed alpha
Helix 15
15
A
448 464Right-handed alpha
Helix 16
16
A
491 516Right-handed alpha
Helix 17
17
A
516 528Right-handed alpha
Helix 18
18
A
532 544Right-handed alpha
Helix 19
19
A
560 564Right-handed 310
Helix 20
20
A
588 592Right-handed 310
Helix 21
21
A
599 607Right-handed alpha
Helix 22
22
A
608 611Right-handed 310
Helix 23
23
A
612 625Right-handed alpha
Helix 24
24
A
633 645Right-handed alpha
Helix 25
25
A
647 660Right-handed alpha
Helix 26
26
A
669 673Right-handed 310
Helix 27
27
A
675 689Right-handed alpha
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There are 9 sheets in PDB entry 3WIQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
89 98anti-parallel
Strand 3
A
103 111anti-parallel
Strand 4
A
117 126anti-parallel
Strand 5
A
133 142anti-parallel
Strand 6
A
239 250anti-parallel
Strand 7
A
197 208anti-parallel
Strand 8
A
185 191anti-parallel
Strand 9
A
173 180anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
89 98anti-parallel
Strand 3
A
103 111anti-parallel
Strand 4
A
117 126anti-parallel
Strand 5
A
133 142anti-parallel
Strand 6
A
239 250anti-parallel
Strand 7
A
197 208anti-parallel
Strand 8
A
211 212anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
32 34anti-parallel
Strand 3
A
49 51anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
64 65anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
70 78anti-parallel
Strand 3
A
147 156anti-parallel
Strand 4
A
225 234anti-parallel
Strand 5
A
216 221anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 298first strand
Strand 2
A
713 720anti-parallel
Strand 3
A
723 730anti-parallel
Strand 4
A
734 740anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 406first strand
Strand 2
A
412 414anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 467first strand
Strand 2
A
472 474anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
694 696first strand
Strand 2
A
700 702anti-parallel
Strand 3
A
747 748parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il