Analysis of interatomic Contacts of Structural Units in PDB entry:
3WIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WIW entry

There is 1 chain in PDB entry 3WIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28THR 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3WIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 50Right-handed alpha
Helix 2
2
A
76 90Right-handed alpha
Helix 3
3
A
91 104Right-handed alpha
Helix 4
4
A
105 111Right-handed 310
Helix 5
5
A
116 121Right-handed alpha
Helix 6
6
A
124 133Right-handed alpha
Helix 7
7
A
134 136Right-handed 310
Helix 8
8
A
137 151Right-handed alpha
Helix 9
9
A
174 189Right-handed alpha
Helix 10
10
A
191 209Right-handed alpha
Helix 11
11
A
244 263Right-handed alpha
Helix 12
12
A
264 280Right-handed alpha
Helix 13
13
A
305 323Right-handed alpha
Helix 14
14
A
326 341Right-handed alpha
Helix 15
15
A
351 355Right-handed 310
Helix 16
16
A
364 367Right-handed 310
Helix 17
17
A
374 393Right-handed alpha
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There are 4 sheets in PDB entry 3WIW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
65 68anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
158 159anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
219 222anti-parallel
Strand 3
A
229 233anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
368 372anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il