Analysis of interatomic Contacts of Structural Units in PDB entry:
3WJ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WJ7 entry

There are 3 chains in PDB entry 3WJ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 10LYS 339
B
 ASN 10LYS 339
C
 ASN 10LYS 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 3WJ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
67 73Right-handed alpha
Helix 3
3
A
91 113Right-handed alpha
Helix 4
4
A
123 127Right-handed 310
Helix 5
5
A
143 147Right-handed 310
Helix 6
6
A
149 170Right-handed alpha
Helix 7
7
A
190 201Right-handed alpha
Helix 8
8
A
217 231Right-handed alpha
Helix 9
9
A
246 257Right-handed alpha
Helix 10
10
A
267 270Right-handed 310
Helix 11
11
A
271 286Right-handed alpha
Helix 12
12
A
292 300Right-handed alpha
Helix 13
13
A
307 315Right-handed alpha
Helix 14
14
A
320 335Right-handed alpha
Helix 15
15
B
20 32Right-handed alpha
Helix 16
16
B
64 66Right-handed 310
Helix 17
17
B
67 73Right-handed alpha
Helix 18
18
B
91 113Right-handed alpha
Helix 19
19
B
123 127Right-handed 310
Helix 20
20
B
143 147Right-handed 310
Helix 21
21
B
149 169Right-handed alpha
Helix 22
22
B
190 201Right-handed alpha
Helix 23
23
B
217 231Right-handed alpha
Helix 24
24
B
246 258Right-handed alpha
Helix 25
25
B
267 270Right-handed 310
Helix 26
26
B
271 286Right-handed alpha
Helix 27
27
B
292 300Right-handed alpha
Helix 28
28
B
307 315Right-handed alpha
Helix 29
29
B
320 335Right-handed alpha
Helix 30
30
C
22 32Right-handed alpha
Helix 31
31
C
64 66Right-handed 310
Helix 32
32
C
67 73Right-handed alpha
Helix 33
33
C
91 113Right-handed alpha
Helix 34
34
C
123 127Right-handed 310
Helix 35
35
C
143 147Right-handed 310
Helix 36
36
C
149 169Right-handed alpha
Helix 37
37
C
190 201Right-handed alpha
Helix 38
38
C
217 231Right-handed alpha
Helix 39
39
C
246 258Right-handed alpha
Helix 40
40
C
267 270Right-handed 310
Helix 41
41
C
271 286Right-handed alpha
Helix 42
42
C
292 300Right-handed alpha
Helix 43
43
C
307 315Right-handed alpha
Helix 44
44
C
320 335Right-handed alpha
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There are 9 sheets in PDB entry 3WJ7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
36 41parallel
Strand 3
A
12 15parallel
Strand 4
A
75 80parallel
Strand 5
A
117 121parallel
Strand 6
A
173 178parallel
Strand 7
A
236 239parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 182first strand
Strand 2
A
211 216parallel
Strand 3
A
242 245anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
264 266parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
37 41parallel
Strand 3
B
12 16parallel
Strand 4
B
75 80parallel
Strand 5
B
117 121parallel
Strand 6
B
173 178parallel
Strand 7
B
236 239parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 182first strand
Strand 2
B
211 216parallel
Strand 3
B
242 245anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 208first strand
Strand 2
B
264 266parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 39first strand
Strand 2
C
12 16parallel
Strand 3
C
75 80parallel
Strand 4
C
117 121parallel
Strand 5
C
173 178parallel
Strand 6
C
236 239parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
180 182first strand
Strand 2
C
211 216parallel
Strand 3
C
242 245anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
206 208first strand
Strand 2
C
264 266parallel
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