Analysis of interatomic Contacts of Structural Units in PDB entry:
3WJA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WJA entry

There are 2 chains in PDB entry 3WJA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 18LYS 579
B
 ARG 18TYR 82
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 3WJA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 30Right-handed alpha
Helix 2
2
A
36 40Right-handed 310
Helix 3
3
A
41 48Right-handed alpha
Helix 4
4
A
60 75Right-handed alpha
Helix 5
5
A
77 92Right-handed alpha
Helix 6
6
A
92 103Right-handed alpha
Helix 7
7
A
103 112Right-handed alpha
Helix 8
8
A
114 122Right-handed alpha
Helix 9
9
A
138 140Right-handed 310
Helix 10
10
A
142 148Right-handed alpha
Helix 11
11
A
172 176Right-handed 310
Helix 12
12
A
177 192Right-handed alpha
Helix 13
13
A
194 196Right-handed 310
Helix 14
14
A
209 215Right-handed alpha
Helix 15
15
A
227 247Right-handed alpha
Helix 16
16
A
258 270Right-handed alpha
Helix 17
17
A
280 299Right-handed alpha
Helix 18
18
A
301 305Right-handed 310
Helix 19
19
A
313 330Right-handed alpha
Helix 20
20
A
333 338Right-handed alpha
Helix 21
21
A
358 363Right-handed alpha
Helix 22
22
A
373 382Right-handed alpha
Helix 23
23
A
397 408Right-handed alpha
Helix 24
24
A
419 423Right-handed 310
Helix 25
25
A
426 435Right-handed alpha
Helix 26
26
A
463 466Right-handed 310
Helix 27
27
A
467 479Right-handed alpha
Helix 28
28
A
484 498Right-handed alpha
Helix 29
29
A
500 506Right-handed alpha
Helix 30
30
A
512 514Right-handed 310
Helix 31
31
A
515 534Right-handed alpha
Helix 32
32
A
545 553Right-handed alpha
Helix 33
33
A
570 575Right-handed alpha
Helix 34
34
B
25 30Right-handed alpha
Helix 35
35
B
36 40Right-handed 310
Helix 36
36
B
41 48Right-handed alpha
Helix 37
37
B
60 74Right-handed alpha
Helix 38
38
B
77 90Right-handed alpha
Helix 39
39
B
92 103Right-handed alpha
Helix 40
40
B
103 112Right-handed alpha
Helix 41
41
B
114 122Right-handed alpha
Helix 42
42
B
138 140Right-handed 310
Helix 43
43
B
142 148Right-handed alpha
Helix 44
44
B
172 176Right-handed 310
Helix 45
45
B
177 192Right-handed alpha
Helix 46
46
B
194 196Right-handed 310
Helix 47
47
B
209 214Right-handed alpha
Helix 48
48
B
227 247Right-handed alpha
Helix 49
49
B
258 270Right-handed alpha
Helix 50
50
B
278 299Right-handed alpha
Helix 51
51
B
301 305Right-handed 310
Helix 52
52
B
313 331Right-handed alpha
Helix 53
53
B
333 339Right-handed alpha
Helix 54
54
B
358 363Right-handed alpha
Helix 55
55
B
373 382Right-handed alpha
Helix 56
56
B
397 408Right-handed alpha
Helix 57
57
B
419 423Right-handed 310
Helix 58
58
B
426 434Right-handed alpha
Helix 59
59
B
463 466Right-handed 310
Helix 60
60
B
467 478Right-handed alpha
Helix 61
61
B
484 498Right-handed alpha
Helix 62
62
B
500 506Right-handed alpha
Helix 63
63
B
512 514Right-handed 310
Helix 64
64
B
515 534Right-handed alpha
Helix 65
65
B
545 554Right-handed alpha
Helix 66
66
B
570 575Right-handed alpha
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There are 6 sheets in PDB entry 3WJA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
198 204parallel
Strand 3
A
157 161parallel
Strand 4
A
251 254parallel
Strand 5
A
275 277parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
341 345anti-parallel
Strand 3
A
307 310parallel
Strand 4
A
385 388parallel
Strand 5
A
412 415parallel
Strand 6
A
439 442parallel
Strand 7
A
460 461parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 450first strand
Strand 2
A
456 457anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
198 204parallel
Strand 3
B
157 161parallel
Strand 4
B
251 254parallel
Strand 5
B
275 277parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 349first strand
Strand 2
B
341 345anti-parallel
Strand 3
B
307 310parallel
Strand 4
B
385 388parallel
Strand 5
B
412 415parallel
Strand 6
B
439 442parallel
Strand 7
B
460 461parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
449 450first strand
Strand 2
B
456 457anti-parallel
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