Analysis of interatomic Contacts of Structural Units in PDB entry:
3WJM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WJM entry

There are 2 chains in PDB entry 3WJM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 24	TYR 693
B	GLU 21	PRO 528

There are219 helices in PDB entry 3WJM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	31	44	Right-handed alpha
Helix 2	2	A	55	64	Right-handed alpha
Helix 3	3	A	66	73	Right-handed 310
Helix 4	4	A	75	89	Right-handed alpha
Helix 5	5	A	101	117	Right-handed alpha
Helix 6	6	A	120	135	Right-handed alpha
Helix 7	7	A	136	151	Right-handed alpha
Helix 8	8	A	152	155	Right-handed 310
Helix 9	9	A	161	166	Right-handed alpha
Helix 10	10	A	167	171	Right-handed 310
Helix 11	11	A	172	186	Right-handed alpha
Helix 12	12	A	190	197	Right-handed alpha
Helix 13	13	A	212	216	Right-handed 310
Helix 14	14	A	220	224	Right-handed 310
Helix 15	15	A	225	230	Right-handed alpha
Helix 16	16	A	231	245	Right-handed alpha
Helix 17	17	A	251	259	Right-handed 310
Helix 18	18	A	260	283	Right-handed alpha
Helix 19	19	A	323	325	Right-handed 310
Helix 20	20	A	326	347	Right-handed alpha
Helix 21	21	A	360	362	Right-handed 310
Helix 22	22	A	363	373	Right-handed alpha
Helix 23	23	A	374	378	Right-handed 310
Helix 24	24	A	389	399	Right-handed alpha
Helix 25	25	A	413	417	Right-handed 310
Helix 26	26	A	420	423	Right-handed 310
Helix 27	27	A	424	443	Right-handed alpha
Helix 28	28	A	449	454	Right-handed alpha
Helix 29	29	A	480	483	Right-handed 310
Helix 30	30	A	486	492	Right-handed alpha
Helix 31	31	A	542	547	Right-handed alpha
Helix 32	32	A	548	550	Right-handed 310
Helix 33	33	A	572	574	Right-handed 310
Helix 34	34	A	583	593	Right-handed alpha
Helix 35	35	A	597	602	Right-handed alpha
Helix 36	36	A	610	612	Right-handed 310
Helix 37	37	A	661	666	Right-handed alpha
Helix 38	38	A	684	689	Right-handed 310
Helix 39	39	B	28	40	Right-handed alpha
Helix 40	40	B	41	43	Right-handed 310
Helix 41	41	B	52	60	Right-handed alpha
Helix 42	42	B	66	70	Right-handed 310
Helix 43	43	B	72	86	Right-handed alpha
Helix 44	44	B	98	114	Right-handed alpha
Helix 45	45	B	117	132	Right-handed alpha
Helix 46	46	B	133	148	Right-handed alpha
Helix 47	47	B	158	163	Right-handed alpha
Helix 48	48	B	164	167	Right-handed 310
Helix 49	49	B	169	183	Right-handed alpha
Helix 50	50	B	187	194	Right-handed alpha
Helix 51	51	B	217	221	Right-handed 310
Helix 52	52	B	222	227	Right-handed alpha
Helix 53	53	B	228	242	Right-handed alpha
Helix 54	54	B	248	256	Right-handed 310
Helix 55	55	B	257	280	Right-handed alpha
Helix 56	56	B	320	322	Right-handed 310
Helix 57	57	B	323	344	Right-handed alpha
Helix 58	58	B	358	370	Right-handed alpha
Helix 59	59	B	371	376	Right-handed 310
Helix 60	60	B	386	397	Right-handed alpha
Helix 61	61	B	410	414	Right-handed 310
Helix 62	62	B	417	420	Right-handed 310
Helix 63	63	B	421	440	Right-handed alpha
Helix 64	64	B	446	451	Right-handed alpha
Helix 65	65	B	477	480	Right-handed 310
Helix 66	66	B	483	488	Right-handed alpha
Helix 67	67	B	538	546	Right-handed 310
Helix 68	68	B	568	570	Right-handed 310
Helix 69	69	B	579	588	Right-handed alpha
Helix 70	70	B	594	599	Right-handed alpha
Helix 71	71	B	606	609	Right-handed 310
Helix 72	72	B	657	661	Right-handed 310
Helix 73	73	B	680	685	Right-handed 310
Helix 74	74	C	28	41	Right-handed alpha
Helix 75	75	C	52	61	Right-handed alpha
Helix 76	76	C	66	70	Right-handed 310
Helix 77	77	C	72	86	Right-handed alpha
Helix 78	78	C	98	114	Right-handed alpha
Helix 79	79	C	117	132	Right-handed alpha
Helix 80	80	C	133	148	Right-handed alpha
Helix 81	81	C	158	163	Right-handed alpha
Helix 82	82	C	164	167	Right-handed 310
Helix 83	83	C	169	183	Right-handed alpha
Helix 84	84	C	187	194	Right-handed alpha
Helix 85	85	C	217	221	Right-handed 310
Helix 86	86	C	222	227	Right-handed alpha
Helix 87	87	C	228	242	Right-handed alpha
Helix 88	88	C	248	256	Right-handed 310
Helix 89	89	C	257	280	Right-handed alpha
Helix 90	90	C	320	322	Right-handed 310
Helix 91	91	C	323	344	Right-handed alpha
Helix 92	92	C	358	370	Right-handed alpha
Helix 93	93	C	371	376	Right-handed 310
Helix 94	94	C	386	397	Right-handed alpha
Helix 95	95	C	410	414	Right-handed 310
Helix 96	96	C	417	420	Right-handed 310
Helix 97	97	C	421	440	Right-handed alpha
Helix 98	98	C	446	451	Right-handed alpha
Helix 99	99	C	477	480	Right-handed 310
Helix 100	100	C	483	488	Right-handed alpha
Helix 101	101	C	538	543	Right-handed alpha
Helix 102	102	C	544	546	Right-handed 310
Helix 103	103	C	568	570	Right-handed 310
Helix 104	104	C	579	588	Right-handed alpha
Helix 105	105	C	594	599	Right-handed alpha
Helix 106	106	C	606	609	Right-handed 310
Helix 107	107	C	657	661	Right-handed 310
Helix 108	108	C	680	685	Right-handed 310
Helix 109	109	D	28	41	Right-handed alpha
Helix 110	110	D	52	60	Right-handed alpha
Helix 111	111	D	66	70	Right-handed 310
Helix 112	112	D	72	86	Right-handed alpha
Helix 113	113	D	98	114	Right-handed alpha
Helix 114	114	D	117	132	Right-handed alpha
Helix 115	115	D	133	148	Right-handed alpha
Helix 116	116	D	158	163	Right-handed alpha
Helix 117	117	D	164	167	Right-handed 310
Helix 118	118	D	169	182	Right-handed alpha
Helix 119	119	D	187	193	Right-handed alpha
Helix 120	120	D	217	221	Right-handed 310
Helix 121	121	D	222	227	Right-handed alpha
Helix 122	122	D	228	242	Right-handed alpha
Helix 123	123	D	248	256	Right-handed 310
Helix 124	124	D	257	280	Right-handed alpha
Helix 125	125	D	320	322	Right-handed 310
Helix 126	126	D	323	344	Right-handed alpha
Helix 127	127	D	358	370	Right-handed alpha
Helix 128	128	D	371	376	Right-handed 310
Helix 129	129	D	386	397	Right-handed alpha
Helix 130	130	D	410	414	Right-handed 310
Helix 131	131	D	417	420	Right-handed 310
Helix 132	132	D	421	440	Right-handed alpha
Helix 133	133	D	446	451	Right-handed alpha
Helix 134	134	D	477	480	Right-handed 310
Helix 135	135	D	483	488	Right-handed alpha
Helix 136	136	D	538	543	Right-handed alpha
Helix 137	137	D	544	546	Right-handed 310
Helix 138	138	D	568	570	Right-handed 310
Helix 139	139	D	579	588	Right-handed alpha
Helix 140	140	D	594	599	Right-handed alpha
Helix 141	141	D	606	608	Right-handed 310
Helix 142	142	D	657	661	Right-handed 310
Helix 143	143	D	680	685	Right-handed 310
Helix 144	144	E	31	44	Right-handed alpha
Helix 145	145	E	55	64	Right-handed alpha
Helix 146	146	E	66	73	Right-handed 310
Helix 147	147	E	75	89	Right-handed alpha
Helix 148	148	E	101	117	Right-handed alpha
Helix 149	149	E	120	135	Right-handed alpha
Helix 150	150	E	136	151	Right-handed alpha
Helix 151	151	E	152	155	Right-handed 310
Helix 152	152	E	161	166	Right-handed alpha
Helix 153	153	E	167	171	Right-handed 310
Helix 154	154	E	172	186	Right-handed alpha
Helix 155	155	E	190	197	Right-handed alpha
Helix 156	156	E	212	216	Right-handed 310
Helix 157	157	E	220	224	Right-handed 310
Helix 158	158	E	225	230	Right-handed alpha
Helix 159	159	E	231	245	Right-handed alpha
Helix 160	160	E	251	259	Right-handed 310
Helix 161	161	E	260	283	Right-handed alpha
Helix 162	162	E	323	325	Right-handed 310
Helix 163	163	E	326	347	Right-handed alpha
Helix 164	164	E	360	362	Right-handed 310
Helix 165	165	E	363	373	Right-handed alpha
Helix 166	166	E	374	378	Right-handed 310
Helix 167	167	E	389	399	Right-handed alpha
Helix 168	168	E	413	417	Right-handed 310
Helix 169	169	E	420	423	Right-handed 310
Helix 170	170	E	424	443	Right-handed alpha
Helix 171	171	E	449	454	Right-handed alpha
Helix 172	172	E	480	483	Right-handed 310
Helix 173	173	E	486	492	Right-handed alpha
Helix 174	174	E	542	547	Right-handed alpha
Helix 175	175	E	548	550	Right-handed 310
Helix 176	176	E	572	574	Right-handed 310
Helix 177	177	E	583	592	Right-handed alpha
Helix 178	178	E	597	602	Right-handed alpha
Helix 179	179	E	610	612	Right-handed 310
Helix 180	180	E	661	666	Right-handed alpha
Helix 181	181	E	684	689	Right-handed 310
Helix 182	182	F	31	44	Right-handed alpha
Helix 183	183	F	55	64	Right-handed alpha
Helix 184	184	F	66	73	Right-handed 310
Helix 185	185	F	75	89	Right-handed alpha
Helix 186	186	F	101	117	Right-handed alpha
Helix 187	187	F	120	135	Right-handed alpha
Helix 188	188	F	136	151	Right-handed alpha
Helix 189	189	F	152	155	Right-handed 310
Helix 190	190	F	161	166	Right-handed alpha
Helix 191	191	F	167	171	Right-handed 310
Helix 192	192	F	172	186	Right-handed alpha
Helix 193	193	F	190	197	Right-handed alpha
Helix 194	194	F	212	216	Right-handed 310
Helix 195	195	F	220	224	Right-handed 310
Helix 196	196	F	225	230	Right-handed alpha
Helix 197	197	F	231	245	Right-handed alpha
Helix 198	198	F	251	259	Right-handed 310
Helix 199	199	F	260	283	Right-handed alpha
Helix 200	200	F	323	325	Right-handed 310
Helix 201	201	F	326	347	Right-handed alpha
Helix 202	202	F	360	362	Right-handed 310
Helix 203	203	F	363	373	Right-handed alpha
Helix 204	204	F	374	379	Right-handed alpha
Helix 205	205	F	389	400	Right-handed alpha
Helix 206	206	F	413	417	Right-handed 310
Helix 207	207	F	420	423	Right-handed 310
Helix 208	208	F	424	443	Right-handed alpha
Helix 209	209	F	449	454	Right-handed alpha
Helix 210	210	F	480	483	Right-handed 310
Helix 211	211	F	486	492	Right-handed alpha
Helix 212	212	F	542	547	Right-handed alpha
Helix 213	213	F	548	550	Right-handed 310
Helix 214	214	F	572	574	Right-handed 310
Helix 215	215	F	583	592	Right-handed alpha
Helix 216	216	F	597	602	Right-handed alpha
Helix 217	217	F	610	612	Right-handed 310
Helix 218	218	F	661	666	Right-handed alpha
Helix 219	219	F	684	689	Right-handed 310

There are 35 sheets in PDB entry 3WJM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	202	first strand
Strand 2	A	205	209	anti-parallel
Strand 3	A	498	507	parallel
Strand 4	A	468	478	anti-parallel
Strand 5	A	670	679	parallel
Strand 6	A	621	631	anti-parallel
Strand 7	A	522	532	anti-parallel
Strand 8	A	551	560	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	297	first strand
Strand 2	A	319	320	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	307	first strand
Strand 2	A	310	311	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	351	first strand
Strand 2	A	354	357	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	465	first strand
Strand 2	A	511	518	anti-parallel
Strand 3	A	563	570	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	577	578	first strand
Strand 2	A	607	608	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	591	593	anti-parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	196	198	first strand
Strand 2	B	203	206	anti-parallel
Strand 3	B	494	503	parallel
Strand 4	B	465	475	anti-parallel
Strand 5	B	666	675	parallel
Strand 6	B	617	627	anti-parallel
Strand 7	B	519	528	anti-parallel
Strand 8	B	547	555	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	294	first strand
Strand 2	B	316	317	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	345	348	first strand
Strand 2	B	351	354	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	455	462	first strand
Strand 2	B	507	514	anti-parallel
Strand 3	B	559	566	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	574	first strand
Strand 2	B	603	604	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	26	first strand
Strand 2	C	591	593	anti-parallel

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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	196	199	first strand
Strand 2	C	202	206	anti-parallel
Strand 3	C	494	503	parallel
Strand 4	C	465	475	anti-parallel
Strand 5	C	666	675	parallel
Strand 6	C	617	627	anti-parallel
Strand 7	C	518	528	anti-parallel
Strand 8	C	547	556	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	293	294	first strand
Strand 2	C	316	317	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	346	first strand
Strand 2	C	353	354	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	455	462	first strand
Strand 2	C	507	514	anti-parallel
Strand 3	C	559	566	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	573	574	first strand
Strand 2	C	603	604	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	26	first strand
Strand 2	D	591	593	anti-parallel

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There are 8 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	196	199	first strand
Strand 2	D	202	206	anti-parallel
Strand 3	D	494	503	parallel
Strand 4	D	465	475	anti-parallel
Strand 5	D	666	675	parallel
Strand 6	D	617	627	anti-parallel
Strand 7	D	519	528	anti-parallel
Strand 8	D	547	555	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	293	294	first strand
Strand 2	D	316	317	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	348	first strand
Strand 2	D	351	354	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	455	462	first strand
Strand 2	D	507	514	anti-parallel
Strand 3	D	559	566	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	574	first strand
Strand 2	D	603	604	parallel

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There are 8 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	199	202	first strand
Strand 2	E	205	209	anti-parallel
Strand 3	E	498	507	parallel
Strand 4	E	468	478	anti-parallel
Strand 5	E	670	679	parallel
Strand 6	E	621	631	anti-parallel
Strand 7	E	522	532	anti-parallel
Strand 8	E	551	560	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	296	297	first strand
Strand 2	E	319	320	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	306	307	first strand
Strand 2	E	310	311	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	348	351	first strand
Strand 2	E	354	357	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	458	465	first strand
Strand 2	E	511	518	anti-parallel
Strand 3	E	563	570	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	577	578	first strand
Strand 2	E	607	608	parallel

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There are 8 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	199	202	first strand
Strand 2	F	205	209	anti-parallel
Strand 3	F	498	507	parallel
Strand 4	F	468	478	anti-parallel
Strand 5	F	670	679	parallel
Strand 6	F	621	631	anti-parallel
Strand 7	F	522	532	anti-parallel
Strand 8	F	551	560	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	296	297	first strand
Strand 2	F	319	320	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	348	351	first strand
Strand 2	F	354	357	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	458	465	first strand
Strand 2	F	511	518	anti-parallel
Strand 3	F	563	570	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	577	578	first strand
Strand 2	F	607	608	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WJM

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WJM