Analysis of interatomic Contacts of Structural Units in PDB entry:
3WJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WJS entry

There is 1 chain in PDB entry 3WJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3WJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 46Right-handed alpha
Helix 2
2
A
74 91Right-handed alpha
Helix 3
3
A
107 112Right-handed alpha
Helix 4
4
A
143 165Right-handed alpha
Helix 5
5
A
177 184Right-handed alpha
Helix 6
6
A
197 217Right-handed alpha
Helix 7
7
A
242 254Right-handed alpha
Helix 8
8
A
277 283Right-handed alpha
Helix 9
9
A
296 306Right-handed alpha
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There are 4 sheets in PDB entry 3WJS. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
13 15anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
95 100parallel
Strand 3
A
168 172parallel
Strand 4
A
221 225parallel
Strand 5
A
257 261parallel
Strand 6
A
289 292parallel
Strand 7
A
311 314parallel
Strand 8
A
19 21parallel
Strand 9
A
51 53parallel
Strand 10
A
95 100parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
140 141parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
134 135anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il