Analysis of interatomic Contacts of Structural Units in PDB entry:
3WKT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WKT entry

There are 4 chains in PDB entry 3WKT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 66SER 674
B
 VAL 70SER 674
C
 SER 10GLU 223
D
 SER 10GLU 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 3WKT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 77Right-handed alpha
Helix 2
2
A
89 104Right-handed alpha
Helix 3
3
A
113 117Right-handed 310
Helix 4
4
A
118 128Right-handed 310
Helix 5
5
A
146 148Right-handed 310
Helix 6
6
A
149 158Right-handed alpha
Helix 7
7
A
182 195Right-handed alpha
Helix 8
8
A
211 232Right-handed alpha
Helix 9
9
A
250 254Right-handed 310
Helix 10
10
A
323 335Right-handed alpha
Helix 11
11
A
362 370Right-handed alpha
Helix 12
12
A
378 386Right-handed alpha
Helix 13
13
A
387 389Right-handed 310
Helix 14
14
A
391 401Right-handed alpha
Helix 15
15
A
406 416Right-handed alpha
Helix 16
16
A
422 430Right-handed alpha
Helix 17
17
A
436 444Right-handed alpha
Helix 18
18
A
484 493Right-handed alpha
Helix 19
19
A
529 532Right-handed 310
Helix 20
20
A
533 549Right-handed alpha
Helix 21
21
A
571 581Right-handed alpha
Helix 22
22
A
600 618Right-handed alpha
Helix 23
23
A
631 648Right-handed alpha
Helix 24
24
A
651 666Right-handed alpha
Helix 25
25
B
71 77Right-handed alpha
Helix 26
26
B
89 102Right-handed alpha
Helix 27
27
B
103 105Right-handed 310
Helix 28
28
B
124 128Right-handed 310
Helix 29
29
B
146 148Right-handed 310
Helix 30
30
B
149 158Right-handed alpha
Helix 31
31
B
182 195Right-handed alpha
Helix 32
32
B
211 224Right-handed alpha
Helix 33
33
B
225 227Right-handed 310
Helix 34
34
B
250 254Right-handed 310
Helix 35
35
B
323 335Right-handed alpha
Helix 36
36
B
362 370Right-handed alpha
Helix 37
37
B
378 387Right-handed alpha
Helix 38
38
B
391 401Right-handed alpha
Helix 39
39
B
406 416Right-handed alpha
Helix 40
40
B
422 430Right-handed alpha
Helix 41
41
B
436 444Right-handed alpha
Helix 42
42
B
484 493Right-handed alpha
Helix 43
43
B
529 532Right-handed 310
Helix 44
44
B
533 549Right-handed alpha
Helix 45
45
B
571 581Right-handed alpha
Helix 46
46
B
600 618Right-handed alpha
Helix 47
47
B
631 648Right-handed alpha
Helix 48
48
B
651 665Right-handed alpha
Helix 49
49
C
12 21Right-handed alpha
Helix 50
50
C
21 31Right-handed alpha
Helix 51
51
C
31 39Right-handed alpha
Helix 52
52
C
43 68Right-handed alpha
Helix 53
53
C
74 78Right-handed 310
Helix 54
54
C
85 98Right-handed alpha
Helix 55
55
C
100 105Right-handed alpha
Helix 56
56
C
108 125Right-handed alpha
Helix 57
57
C
128 141Right-handed alpha
Helix 58
58
C
142 156Right-handed alpha
Helix 59
59
C
174 188Right-handed alpha
Helix 60
60
C
192 223Right-handed alpha
Helix 61
61
D
12 30Right-handed alpha
Helix 62
62
D
31 39Right-handed alpha
Helix 63
63
D
43 69Right-handed alpha
Helix 64
64
D
74 78Right-handed 310
Helix 65
65
D
79 84Right-handed alpha
Helix 66
66
D
85 98Right-handed alpha
Helix 67
67
D
100 105Right-handed alpha
Helix 68
68
D
108 125Right-handed alpha
Helix 69
69
D
128 142Right-handed alpha
Helix 70
70
D
142 156Right-handed alpha
Helix 71
71
D
164 168Right-handed 310
Helix 72
72
D
174 189Right-handed alpha
Helix 73
73
D
192 223Right-handed alpha
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There are 11 sheets in PDB entry 3WKT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
80 85parallel
Strand 3
A
132 138parallel
Strand 4
A
167 174parallel
Strand 5
A
198 199parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
80 85parallel
Strand 3
A
132 138parallel
Strand 4
A
167 174parallel
Strand 5
A
204 207parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 245first strand
Strand 2
A
342 346anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 453first strand
Strand 2
A
315 318anti-parallel
Strand 3
A
504 510anti-parallel
Strand 4
A
278 287anti-parallel
Strand 5
A
295 302anti-parallel
Strand 6
A
464 471anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 475first strand
Strand 2
A
481 483anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 591first strand
Strand 2
A
556 562parallel
Strand 3
A
524 527parallel
Strand 4
A
622 628parallel
Strand 5
A
668 673parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
80 85parallel
Strand 3
B
132 138parallel
Strand 4
B
167 174parallel
Strand 5
B
198 207parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 245first strand
Strand 2
B
342 346anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
450 453first strand
Strand 2
B
315 318anti-parallel
Strand 3
B
505 510anti-parallel
Strand 4
B
278 287anti-parallel
Strand 5
B
295 302anti-parallel
Strand 6
B
464 471anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 475first strand
Strand 2
B
481 483anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
586 591first strand
Strand 2
B
556 562parallel
Strand 3
B
524 527parallel
Strand 4
B
622 628parallel
Strand 5
B
668 673parallel
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