Analysis of interatomic Contacts of Structural Units in PDB entry:
3WL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WL6 entry

There are 2 chains in PDB entry 3WL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 19ALA 351
B
 LYS 19SER 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3WL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 26Right-handed 310
Helix 2
2
A
69 76Right-handed alpha
Helix 3
3
A
77 80Right-handed 310
Helix 4
4
A
81 89Right-handed 310
Helix 5
5
A
97 101Right-handed 310
Helix 6
6
A
131 139Right-handed 310
Helix 7
7
A
142 156Right-handed alpha
Helix 8
8
A
172 185Right-handed alpha
Helix 9
9
A
210 221Right-handed alpha
Helix 10
10
A
270 284Right-handed alpha
Helix 11
11
A
304 318Right-handed alpha
Helix 12
12
A
324 328Right-handed 310
Helix 13
13
B
69 76Right-handed alpha
Helix 14
14
B
77 80Right-handed 310
Helix 15
15
B
81 89Right-handed 310
Helix 16
16
B
97 101Right-handed 310
Helix 17
17
B
131 139Right-handed 310
Helix 18
18
B
142 159Right-handed alpha
Helix 19
19
B
172 185Right-handed alpha
Helix 20
20
B
210 221Right-handed alpha
Helix 21
21
B
269 284Right-handed alpha
Helix 22
22
B
304 318Right-handed alpha
Helix 23
23
B
324 328Right-handed 310
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There are 3 sheets in PDB entry 3WL6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 38first strand
Strand 2
A
41 48anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
57 63parallel
Strand 5
A
161 171parallel
Strand 6
A
191 195parallel
Strand 7
A
242 248parallel
Strand 8
A
287 293parallel
Strand 9
A
338 341anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 258first strand
Strand 2
A
264 269anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 38first strand
Strand 2
B
41 48anti-parallel
Strand 3
B
91 95anti-parallel
Strand 4
B
57 63parallel
Strand 5
B
161 171parallel
Strand 6
B
191 195parallel
Strand 7
B
242 248parallel
Strand 8
B
287 293parallel
Strand 9
B
338 341anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il