Analysis of interatomic Contacts of Structural Units in PDB entry:
3WLC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WLC entry

There are 2 chains in PDB entry 3WLC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 38LEU 221
A
 VAL 225THR 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3WLC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 57Right-handed alpha
Helix 2
2
A
160 166Right-handed 310
Helix 3
3
A
213 217Right-handed 310
Helix 4
4
A
225 229Right-handed 310
Helix 5
5
A
232 238Right-handed 310
Helix 6
6
A
239 244Right-handed alpha
Helix 7
7
A
307 322Right-handed alpha
Helix 8
8
A
330 341Right-handed alpha
Helix 9
9
A
346 356Right-handed alpha
Helix 10
10
A
367 376Right-handed alpha
Helix 11
11
A
379 395Right-handed alpha
Helix 12
12
A
403 415Right-handed alpha
Helix 13
13
A
419 431Right-handed alpha
Helix 14
14
A
439 448Right-handed alpha
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There are 2 sheets in PDB entry 3WLC. Click on sheet of interest to get list of strands forming it: A, B,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
72 82anti-parallel
Strand 3
A
88 99anti-parallel
Strand 4
A
249 257anti-parallel
Strand 5
A
262 272anti-parallel
Strand 6
A
275 285anti-parallel
Strand 7
A
169 179parallel
Strand 8
A
182 193anti-parallel
Strand 9
A
198 205anti-parallel
Strand 10
A
129 139anti-parallel
Strand 11
A
111 120anti-parallel
Strand 12
A
62 67anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 329first strand
Strand 2
A
365 366anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il