Analysis of interatomic Contacts of Structural Units in PDB entry:
3WLW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3WLW entry

There are 6 chains in PDB entry 3WLW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 1	ALA 564
B	THR 1	ALA 564
H	GLU 1	PRO 217
L	GLN 1	CYS 217
C	GLU 1	PRO 217
D	GLN 1	CYS 217

There are 39 helices in PDB entry 3WLW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	19	29	Right-handed alpha
Helix 2	2	A	49	55	Right-handed 310
Helix 3	3	A	85	88	Right-handed 310
Helix 4	4	A	141	145	Right-handed 310
Helix 5	5	A	146	151	Right-handed alpha
Helix 6	6	A	186	190	Right-handed 310
Helix 7	7	A	209	213	Right-handed 310
Helix 8	8	A	335	340	Right-handed alpha
Helix 9	9	A	341	343	Right-handed 310
Helix 10	10	A	355	360	Right-handed alpha
Helix 11	11	A	362	366	Right-handed 310
Helix 12	12	A	373	381	Right-handed 310
Helix 13	13	A	414	417	Right-handed 310
Helix 14	14	A	459	464	Right-handed alpha
Helix 15	15	A	479	485	Right-handed alpha
Helix 16	16	A	493	497	Right-handed 310
Helix 17	17	B	19	29	Right-handed alpha
Helix 18	18	B	49	55	Right-handed 310
Helix 19	19	B	85	88	Right-handed 310
Helix 20	20	B	146	151	Right-handed alpha
Helix 21	21	B	186	190	Right-handed 310
Helix 22	22	B	209	213	Right-handed 310
Helix 23	23	B	335	340	Right-handed alpha
Helix 24	24	B	341	343	Right-handed 310
Helix 25	25	B	355	360	Right-handed alpha
Helix 26	26	B	362	366	Right-handed 310
Helix 27	27	B	373	381	Right-handed 310
Helix 28	28	B	400	404	Right-handed 310
Helix 29	29	B	414	417	Right-handed 310
Helix 30	30	B	459	464	Right-handed alpha
Helix 31	31	B	479	484	Right-handed alpha
Helix 32	32	B	493	497	Right-handed 310
Helix 33	33	H	28	31	Right-handed 310
Helix 34	34	H	189	193	Right-handed 310
Helix 35	38	L	124	129	Right-handed alpha
Helix 36	35	C	28	31	Right-handed 310
Helix 37	36	C	74	76	Right-handed 310
Helix 38	37	C	131	135	Right-handed 310
Helix 39	39	D	127	131	Right-handed 310

There are 42 sheets in PDB entry 3WLW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	5	first strand
Strand 2	A	33	35	parallel
Strand 3	A	57	58	parallel
Strand 4	A	79	80	parallel
Strand 5	A	125	126	parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	41	first strand
Strand 2	A	62	65	parallel
Strand 3	A	90	95	parallel
Strand 4	A	130	134	parallel
Strand 5	A	160	162	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	238	first strand
Strand 2	A	241	243	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	252	first strand
Strand 2	A	259	261	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	269	first strand
Strand 2	A	272	274	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	299	first strand
Strand 2	A	309	311	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	348	first strand
Strand 2	A	383	386	parallel
Strand 3	A	408	413	parallel
Strand 4	A	438	439	parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	388	390	parallel
Strand 3	A	419	424	parallel
Strand 4	A	443	447	parallel
Strand 5	A	471	474	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	512	513	first strand
Strand 2	A	518	519	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	531	533	first strand
Strand 2	A	538	540	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	5	first strand
Strand 2	B	33	35	parallel
Strand 3	B	57	58	parallel
Strand 4	B	79	80	parallel
Strand 5	B	125	126	parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	41	first strand
Strand 2	B	62	65	parallel
Strand 3	B	90	95	parallel
Strand 4	B	130	134	parallel
Strand 5	B	160	162	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	238	first strand
Strand 2	B	241	243	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	268	first strand
Strand 2	B	273	274	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	283	first strand
Strand 2	B	289	290	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	297	300	first strand
Strand 2	B	308	311	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	349	first strand
Strand 2	B	383	385	parallel
Strand 3	B	408	409	parallel
Strand 4	B	438	439	parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	354	first strand
Strand 2	B	388	390	parallel
Strand 3	B	419	424	parallel
Strand 4	B	443	449	parallel
Strand 5	B	471	476	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	533	first strand
Strand 2	B	538	539	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	22	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	18	19	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	22	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	113	115	parallel

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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	45	52	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	97	99	anti-parallel
Strand 5	H	104	107	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	125	first strand
Strand 2	H	144	149	anti-parallel
Strand 3	H	180	185	anti-parallel
Strand 4	H	168	169	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	125	first strand
Strand 2	H	144	149	anti-parallel
Strand 3	H	180	185	anti-parallel
Strand 4	H	173	174	anti-parallel

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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	155	158	first strand
Strand 2	H	199	203	anti-parallel
Strand 3	H	212	214	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	6	first strand
Strand 2	C	22	25	anti-parallel
Strand 3	C	78	79	anti-parallel
Strand 4	C	72	73	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	11	first strand
Strand 2	C	113	114	parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	45	52	anti-parallel
Strand 3	C	33	39	anti-parallel
Strand 4	C	95	99	anti-parallel
Strand 5	C	104	107	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	144	149	anti-parallel
Strand 3	C	180	186	anti-parallel
Strand 4	C	167	169	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	144	149	anti-parallel
Strand 3	C	180	186	anti-parallel
Strand 4	C	173	174	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	158	first strand
Strand 2	C	198	202	anti-parallel
Strand 3	C	212	215	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	20	first strand
Strand 2	L	75	77	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	47	48	first strand
Strand 2	L	35	40	anti-parallel
Strand 3	L	87	92	anti-parallel
Strand 4	L	100	101	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	47	48	first strand
Strand 2	L	35	40	anti-parallel
Strand 3	L	87	92	anti-parallel
Strand 4	L	105	106	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	121	first strand
Strand 2	L	136	142	anti-parallel
Strand 3	L	176	180	anti-parallel
Strand 4	L	164	166	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	156	158	first strand
Strand 2	L	148	153	anti-parallel
Strand 3	L	194	200	anti-parallel
Strand 4	L	208	213	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	19	first strand
Strand 2	D	76	77	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	35	40	anti-parallel
Strand 3	D	87	92	anti-parallel
Strand 4	D	100	101	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	35	40	anti-parallel
Strand 3	D	87	92	anti-parallel
Strand 4	D	105	106	anti-parallel

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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	121	first strand
Strand 2	D	136	137	anti-parallel

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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	153	first strand
Strand 2	D	194	199	anti-parallel
Strand 3	D	208	213	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3WLW

Analysis of interatomic Contacts of Structural Units in PDB entry:
3WLW