Analysis of interatomic Contacts of Structural Units in PDB entry:
3WMF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WMF entry

There is 1 chain in PDB entry 3WMF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 102ALA 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3WMF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
102 132Right-handed alpha
Helix 2
2
A
133 149Right-handed alpha
Helix 3
3
A
152 160Right-handed alpha
Helix 4
4
A
160 205Right-handed alpha
Helix 5
5
A
208 214Right-handed alpha
Helix 6
6
A
218 259Right-handed alpha
Helix 7
7
A
259 308Right-handed alpha
Helix 8
8
A
308 315Right-handed alpha
Helix 9
9
A
317 371Right-handed alpha
Helix 10
10
A
375 419Right-handed alpha
Helix 11
11
A
480 492Right-handed alpha
Helix 12
12
A
513 515Right-handed 310
Helix 13
13
A
516 522Right-handed alpha
Helix 14
14
A
538 544Right-handed alpha
Helix 15
15
A
550 561Right-handed alpha
Helix 16
16
A
563 569Right-handed alpha
Helix 17
17
A
572 575Right-handed 310
Helix 18
18
A
586 600Right-handed alpha
Helix 19
19
A
618 632Right-handed alpha
Helix 20
20
A
644 651Right-handed alpha
Helix 21
21
A
667 674Right-handed alpha
Helix 22
22
A
678 689Right-handed alpha
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There are 3 sheets in PDB entry 3WMF. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 469first strand
Strand 2
A
442 450anti-parallel
Strand 3
A
504 507anti-parallel
Strand 4
A
510 511anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 527first strand
Strand 2
A
605 609parallel
Strand 3
A
637 641parallel
Strand 4
A
473 478parallel
Strand 5
A
653 658parallel
Strand 6
A
661 666anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 537first strand
Strand 2
A
577 578anti-parallel
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