Analysis of interatomic Contacts of Structural Units in PDB entry:
3WMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WMR entry

There are 3 chains in PDB entry 3WMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4VAL 299
B
 PRO 4VAL 299
C
 PRO 4VAL 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3WMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 57Right-handed 310
Helix 2
2
A
83 98Right-handed alpha
Helix 3
3
A
110 122Right-handed alpha
Helix 4
4
A
138 151Right-handed alpha
Helix 5
5
A
154 168Right-handed alpha
Helix 6
6
A
172 187Right-handed alpha
Helix 7
7
A
194 207Right-handed alpha
Helix 8
8
A
208 215Right-handed alpha
Helix 9
9
A
231 238Right-handed 310
Helix 10
10
A
253 264Right-handed alpha
Helix 11
11
A
278 283Right-handed alpha
Helix 12
12
A
283 297Right-handed alpha
Helix 13
13
B
44 57Right-handed 310
Helix 14
14
B
83 98Right-handed alpha
Helix 15
15
B
110 122Right-handed alpha
Helix 16
16
B
138 152Right-handed alpha
Helix 17
17
B
154 168Right-handed alpha
Helix 18
18
B
172 187Right-handed alpha
Helix 19
19
B
194 207Right-handed alpha
Helix 20
20
B
208 215Right-handed alpha
Helix 21
21
B
231 238Right-handed 310
Helix 22
22
B
253 264Right-handed alpha
Helix 23
23
B
278 283Right-handed alpha
Helix 24
24
B
283 297Right-handed alpha
Helix 25
25
C
44 57Right-handed 310
Helix 26
26
C
83 98Right-handed alpha
Helix 27
27
C
110 122Right-handed alpha
Helix 28
28
C
138 151Right-handed alpha
Helix 29
29
C
154 167Right-handed alpha
Helix 30
30
C
172 187Right-handed alpha
Helix 31
31
C
194 207Right-handed alpha
Helix 32
32
C
208 215Right-handed alpha
Helix 33
33
C
231 238Right-handed 310
Helix 34
34
C
253 264Right-handed alpha
Helix 35
35
C
278 283Right-handed alpha
Helix 36
36
C
283 298Right-handed alpha
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There are 3 sheets in PDB entry 3WMR. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
A
16 23anti-parallel
Strand 3
A
60 64anti-parallel
Strand 4
A
33 36parallel
Strand 5
A
104 109parallel
Strand 6
A
127 133parallel
Strand 7
A
242 247parallel
Strand 8
A
267 272parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 13first strand
Strand 2
B
16 23anti-parallel
Strand 3
B
60 64anti-parallel
Strand 4
B
33 36parallel
Strand 5
B
104 109parallel
Strand 6
B
127 133parallel
Strand 7
B
242 247parallel
Strand 8
B
267 272parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 13first strand
Strand 2
C
16 23anti-parallel
Strand 3
C
60 63anti-parallel
Strand 4
C
33 36parallel
Strand 5
C
104 109parallel
Strand 6
C
127 133parallel
Strand 7
C
242 247parallel
Strand 8
C
267 272parallel
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