Analysis of interatomic Contacts of Structural Units in PDB entry:
3WMX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WMX entry

There are 4 chains in PDB entry 3WMX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4LYS 313
B
 PRO 6LYS 313
C
 PRO 6LYS 313
D
 PRO 6LEU 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3WMX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
57 68Right-handed alpha
Helix 3
3
A
80 87Right-handed alpha
Helix 4
4
A
87 110Right-handed alpha
Helix 5
5
A
121 123Right-handed 310
Helix 6
6
A
142 163Right-handed alpha
Helix 7
7
A
187 199Right-handed alpha
Helix 8
8
A
217 230Right-handed alpha
Helix 9
9
A
231 235Right-handed 310
Helix 10
10
A
249 259Right-handed alpha
Helix 11
11
A
271 280Right-handed alpha
Helix 12
12
A
286 294Right-handed alpha
Helix 13
13
A
300 313Right-handed alpha
Helix 14
14
B
17 30Right-handed alpha
Helix 15
15
B
57 69Right-handed alpha
Helix 16
16
B
80 85Right-handed alpha
Helix 17
17
B
87 110Right-handed alpha
Helix 18
18
B
121 123Right-handed 310
Helix 19
19
B
142 163Right-handed alpha
Helix 20
20
B
187 199Right-handed alpha
Helix 21
21
B
217 230Right-handed alpha
Helix 22
22
B
231 235Right-handed 310
Helix 23
23
B
249 261Right-handed alpha
Helix 24
24
B
271 279Right-handed alpha
Helix 25
25
B
286 294Right-handed alpha
Helix 26
26
B
300 313Right-handed alpha
Helix 27
27
C
17 30Right-handed alpha
Helix 28
28
C
57 68Right-handed alpha
Helix 29
29
C
80 87Right-handed alpha
Helix 30
30
C
87 110Right-handed alpha
Helix 31
31
C
121 123Right-handed 310
Helix 32
32
C
142 163Right-handed alpha
Helix 33
33
C
187 199Right-handed alpha
Helix 34
34
C
217 230Right-handed alpha
Helix 35
35
C
231 235Right-handed 310
Helix 36
36
C
249 259Right-handed alpha
Helix 37
37
C
271 279Right-handed alpha
Helix 38
38
C
286 294Right-handed alpha
Helix 39
39
C
300 313Right-handed alpha
Helix 40
40
D
15 30Right-handed alpha
Helix 41
41
D
57 68Right-handed alpha
Helix 42
42
D
80 86Right-handed alpha
Helix 43
43
D
87 110Right-handed alpha
Helix 44
44
D
121 123Right-handed 310
Helix 45
45
D
142 163Right-handed alpha
Helix 46
46
D
187 197Right-handed alpha
Helix 47
47
D
217 230Right-handed alpha
Helix 48
48
D
231 235Right-handed 310
Helix 49
49
D
249 259Right-handed alpha
Helix 50
50
D
271 279Right-handed alpha
Helix 51
51
D
286 294Right-handed alpha
Helix 52
52
D
300 310Right-handed alpha
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There are 16 sheets in PDB entry 3WMX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
34 38parallel
Strand 3
A
8 11parallel
Strand 4
A
72 75parallel
Strand 5
A
113 115parallel
Strand 6
A
166 167parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
A
169 171parallel
Strand 3
A
241 242parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
212 216parallel
Strand 3
A
246 248anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
266 268parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
34 38parallel
Strand 3
B
8 11parallel
Strand 4
B
72 75parallel
Strand 5
B
113 115parallel
Strand 6
B
166 167parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 119first strand
Strand 2
B
169 171parallel
Strand 3
B
241 242parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 175first strand
Strand 2
B
212 216parallel
Strand 3
B
246 248anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 204first strand
Strand 2
B
266 268parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 52first strand
Strand 2
C
34 38parallel
Strand 3
C
8 11parallel
Strand 4
C
72 75parallel
Strand 5
C
113 115parallel
Strand 6
C
166 167parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
118 119first strand
Strand 2
C
169 171parallel
Strand 3
C
241 242parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 175first strand
Strand 2
C
212 216parallel
Strand 3
C
246 248anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 204first strand
Strand 2
C
266 268parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
50 52first strand
Strand 2
D
34 38parallel
Strand 3
D
8 11parallel
Strand 4
D
72 75parallel
Strand 5
D
113 115parallel
Strand 6
D
166 167parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
118 119first strand
Strand 2
D
169 171parallel
Strand 3
D
241 242parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
173 175first strand
Strand 2
D
212 216parallel
Strand 3
D
246 248anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
201 204first strand
Strand 2
D
265 268parallel
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