Analysis of interatomic Contacts of Structural Units in PDB entry:
3WO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WO8 entry

There are 2 chains in PDB entry 3WO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4PHE 461
B
 ASP 4LEU 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3WO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 7Right-handed 310
Helix 2
2
A
17 28Right-handed alpha
Helix 3
3
A
35 40Right-handed alpha
Helix 4
4
A
41 56Right-handed alpha
Helix 5
5
A
80 85Right-handed alpha
Helix 6
6
A
88 107Right-handed alpha
Helix 7
7
A
135 154Right-handed alpha
Helix 8
8
A
182 189Right-handed alpha
Helix 9
9
A
191 201Right-handed alpha
Helix 10
10
A
220 223Right-handed 310
Helix 11
11
A
224 229Right-handed alpha
Helix 12
12
A
249 254Right-handed alpha
Helix 13
13
A
257 268Right-handed alpha
Helix 14
14
A
277 279Right-handed 310
Helix 15
15
A
280 294Right-handed alpha
Helix 16
16
A
298 316Right-handed alpha
Helix 17
17
A
320 322Right-handed 310
Helix 18
18
A
323 332Right-handed alpha
Helix 19
19
A
362 376Right-handed alpha
Helix 20
20
A
409 418Right-handed alpha
Helix 21
21
A
431 439Right-handed 310
Helix 22
22
A
450 458Right-handed alpha
Helix 23
23
B
4 7Right-handed 310
Helix 24
24
B
17 27Right-handed alpha
Helix 25
25
B
35 40Right-handed alpha
Helix 26
26
B
41 56Right-handed alpha
Helix 27
27
B
80 86Right-handed alpha
Helix 28
28
B
88 107Right-handed alpha
Helix 29
29
B
135 154Right-handed alpha
Helix 30
30
B
182 189Right-handed alpha
Helix 31
31
B
191 201Right-handed alpha
Helix 32
32
B
220 223Right-handed 310
Helix 33
33
B
224 229Right-handed alpha
Helix 34
34
B
249 254Right-handed alpha
Helix 35
35
B
257 269Right-handed alpha
Helix 36
36
B
277 279Right-handed 310
Helix 37
37
B
280 294Right-handed alpha
Helix 38
38
B
298 316Right-handed alpha
Helix 39
39
B
322 332Right-handed alpha
Helix 40
40
B
362 375Right-handed alpha
Helix 41
41
B
409 419Right-handed alpha
Helix 42
42
B
431 439Right-handed 310
Helix 43
43
B
450 461Right-handed alpha
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There are 7 sheets in PDB entry 3WO8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
31 34parallel
Strand 3
A
9 13parallel
Strand 4
A
273 275parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
205 208parallel
Strand 3
A
242 243parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
212 213parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 336first strand
Strand 2
A
443 445anti-parallel
Strand 3
A
424 428parallel
Strand 4
A
400 404parallel
Strand 5
A
346 352parallel
Strand 6
A
379 386parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
31 34parallel
Strand 3
B
9 13parallel
Strand 4
B
272 275parallel
Strand 5
B
242 246parallel
Strand 6
B
205 208parallel
Strand 7
B
156 162parallel
Strand 8
B
110 111parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
212 213parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 336first strand
Strand 2
B
442 445anti-parallel
Strand 3
B
424 428parallel
Strand 4
B
400 404parallel
Strand 5
B
346 352parallel
Strand 6
B
380 386parallel
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